| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1195 |
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| Symbol | |
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| ID | 8534348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1302962 |
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| End bp | 1304191 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646383585 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003263078 |
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| Protein GI | 261855795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily
[TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.542201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCGC TCAAACTCGA CGTTGCCGCC ATTCGAAATC AGTTCCCCGC GCTGGATCAA
ACCATTCAGG GCAAGCCGCT GGTGTACCTC GACAATGCCG CCACCACGCA AAAACCCGAA
TGCGTTATTG AAGCGGTAAG CGCGTTTTAT CGTCACGATA ACGCCAATAT TCACCGCGGC
GTACATACCT TGTCGGCGCG TGCGACCGAT CAGTATGAAG CCGCGCGTGA ACAGGTGCGT
CAAAGCCTGA ACGCCAGCGC CACAGAAGAG ATCGTGTTTG TTCGCGGCAC CACCGAAGCC
ATTAATCTGG TGGCATCGAG TTTCGGGCAA ACGCTCAAAG CAGGCGATGA AATCATCATT
TCTGCTTTGG AGCATCACGC CAACATCGTG CCGTGGCAGT TGTTGAAACA GCGCATTAGC
ATCACGCTAA AAATTATACC AGTCACGCCG GAAGGGGAAC TCGATCTTGG CGCACTGCCC
GCGCTGATCA CCGAGCGCAG CCGCCTGATT GCCGTCAATC ATGTTTCGAA TGCCTTGGGC
ACCATTAATC CGGTAGCTCA AATCGCGGCC ATTGCCAAAG CCCATGGCGT ACCGATTTTG
ATTGATGGCG CTCAGGGTCT ACCGCACGGC CCGGTGGATG TTCGGGCCAT TGATTGCGAT
TTTTACACCC TTTCCGGGCA TAAAACATTC GCCCCCAGTG GCGTCGGCGT TCTGTATGCG
CGTCGCCCCT GGTTGGATGA GTTGCCACCC TATCAAGGGG GCGGCGACAT GATCGAGACG
GTCAGTTTCG AGGCCGTGCG CTACGCGCCG CCGCCTGCAA AATTTGAGGC AGGCACCCCC
AATATTGAAG GCGCCATCGG CTTGAACGCG GCACTGCAAT GGCATGCCGC ACTCGATTGG
CCCGCCATTA AAGCGCATGA AGCTGCCCTG CTTGCACACG CCACCACGGC ACTTGAGGCA
ATCGCTGGCT TGCGCATTGT CGGTACGGCA AAAAACAAGG TGCCTGTGCT TTCGTTCATT
ATCGAAGGCG CACACCCGCA CGACATCGGC ATGCTGCTTG ATGCCCAAGG GATTGCGGTG
CGTACCGGAC AACATTGTGC CATGCCGGTT TTGCAGTTTT TAGGTGCGCC ACAAGGCACC
GTGCGCGCTT CATTTGCTTT TTATAACACG CTGGATGAGG TCGATGCGCT GGTTCGCGCT
GTGCATCGCG CCCAGCATAT GCTGAGCTGA
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| Protein sequence | MSSLKLDVAA IRNQFPALDQ TIQGKPLVYL DNAATTQKPE CVIEAVSAFY RHDNANIHRG
VHTLSARATD QYEAAREQVR QSLNASATEE IVFVRGTTEA INLVASSFGQ TLKAGDEIII
SALEHHANIV PWQLLKQRIS ITLKIIPVTP EGELDLGALP ALITERSRLI AVNHVSNALG
TINPVAQIAA IAKAHGVPIL IDGAQGLPHG PVDVRAIDCD FYTLSGHKTF APSGVGVLYA
RRPWLDELPP YQGGGDMIET VSFEAVRYAP PPAKFEAGTP NIEGAIGLNA ALQWHAALDW
PAIKAHEAAL LAHATTALEA IAGLRIVGTA KNKVPVLSFI IEGAHPHDIG MLLDAQGIAV
RTGQHCAMPV LQFLGAPQGT VRASFAFYNT LDEVDALVRA VHRAQHMLS
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