Gene Hneap_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1194 
Symbol 
ID8534347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1301670 
End bp1302950 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content56% 
IMG OID646383584 
ProductFeS assembly protein SufD 
Protein accessionYP_003263077 
Protein GI261855794 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01981] FeS assembly protein SufD, group 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0412715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA CGCCGCTTCC AGAATGGCTG GCCAATTCCC TGACCGACTC CTTGGGATCG 
CAGCAACAGG CAGCGCCGGG CGAGATTCAC ACTGTCGCAC GGGCGCAGGT AATCGAATGG
GGCCTGCCCA CCTTGCGCGA TGAAGAGTGG CGCTGGACAA ATCTGCGCGC CCTCACCCGC
CCCTTGCCGA CATCGAATTC GACTGCCGCG CCTAAAAATA TCGGCGTAAT GGACAGCGTG
CCGCAAGCTT TGTGTATTCG ATTTAATGCC GGCAAGCTCG TTGAGCGCCC CAAAGAATTG
CCCGATGGGA TGACAGTTAC GCCATTACAA GATGCCGACC ATGCCCAACG CAGGGCGGCT
TTTGCGCCAC TTGCCCAAAA CCCGAATGAC GCGCTGTTGG CGCTGAATAC GGCCACAGCG
GCAGAAGGTT TGGTGATTGA CATCGCGCCC AACGCCGACA TCAGCCAGCC CATCGTGATC
GAGTTTGTTG ATGAACCGAC CGATACCGCT GCGCAAACAC GGATTTTGCT GCGCTCGGGC
GTACACAGCC GCGCCACTTT GATTGAAACG GCATCTAGTG GCGATGGTGT CGTCTTTTGG
CGCAATTCGG TACTGGTGGC TGAATTGGCC GCGAACAGCC AGTTAACCCA TCTTTCATTG
GGGCTGGATG GCGATGCTCG TTTGCTTACC GATCGCAGCT TTGTCACGCT CGCGCGTGAT
GCGCGCTATC AATCGATCAA TATTCAGTTG GGCGGGCAAC TGGTCCGTCG CGACATTGAC
GTCAACATCA CCGAAACCGG TGCACACTGC GATTTAATCG GCCTGATGAT GCCGCGAGCC
AAGCAAGTGC TCGATACGCA CACTCGGCTG ATTCACGGTG CCGCGCACAC CACCAGCAAT
GAGCAATACC AAATCATTGC CGACGAATCC GGACGTGGCA TCTTCAAGGG CCGCATTCTT
GTGGCGCAGG ATGCGCAAAA AATCGAAGCG TTCCAGAACA GCCGTAATCT GCTGCTCTCG
GACTCGGCCG AAATTGACAC CAAGCCAGAA CTTGAAATCT ATGCCGATGA TGTCAAATGC
AGTCATGGTG CGACCATTGG CCGTCTCGAC GATGAAGCGC TGTACTACCT CAAAAGCCGA
GGAATCAGTT CAGAAAATGC TCGCAAACTG CTGATTACCG GGTTTGCGCA AGAAATCGTC
GATCAACTGC CCACGCCAGA ATTGGTGGAT TGGTTAGGAC AAATCATCGC TCGGCGGCTT
GAACGCCCGC AAGCGAAATA G
 
Protein sequence
MNRTPLPEWL ANSLTDSLGS QQQAAPGEIH TVARAQVIEW GLPTLRDEEW RWTNLRALTR 
PLPTSNSTAA PKNIGVMDSV PQALCIRFNA GKLVERPKEL PDGMTVTPLQ DADHAQRRAA
FAPLAQNPND ALLALNTATA AEGLVIDIAP NADISQPIVI EFVDEPTDTA AQTRILLRSG
VHSRATLIET ASSGDGVVFW RNSVLVAELA ANSQLTHLSL GLDGDARLLT DRSFVTLARD
ARYQSINIQL GGQLVRRDID VNITETGAHC DLIGLMMPRA KQVLDTHTRL IHGAAHTTSN
EQYQIIADES GRGIFKGRIL VAQDAQKIEA FQNSRNLLLS DSAEIDTKPE LEIYADDVKC
SHGATIGRLD DEALYYLKSR GISSENARKL LITGFAQEIV DQLPTPELVD WLGQIIARRL
ERPQAK