Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1194 |
Symbol | |
ID | 8534347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1301670 |
End bp | 1302950 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383584 |
Product | FeS assembly protein SufD |
Protein accession | YP_003263077 |
Protein GI | 261855794 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0412715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCGCA CGCCGCTTCC AGAATGGCTG GCCAATTCCC TGACCGACTC CTTGGGATCG CAGCAACAGG CAGCGCCGGG CGAGATTCAC ACTGTCGCAC GGGCGCAGGT AATCGAATGG GGCCTGCCCA CCTTGCGCGA TGAAGAGTGG CGCTGGACAA ATCTGCGCGC CCTCACCCGC CCCTTGCCGA CATCGAATTC GACTGCCGCG CCTAAAAATA TCGGCGTAAT GGACAGCGTG CCGCAAGCTT TGTGTATTCG ATTTAATGCC GGCAAGCTCG TTGAGCGCCC CAAAGAATTG CCCGATGGGA TGACAGTTAC GCCATTACAA GATGCCGACC ATGCCCAACG CAGGGCGGCT TTTGCGCCAC TTGCCCAAAA CCCGAATGAC GCGCTGTTGG CGCTGAATAC GGCCACAGCG GCAGAAGGTT TGGTGATTGA CATCGCGCCC AACGCCGACA TCAGCCAGCC CATCGTGATC GAGTTTGTTG ATGAACCGAC CGATACCGCT GCGCAAACAC GGATTTTGCT GCGCTCGGGC GTACACAGCC GCGCCACTTT GATTGAAACG GCATCTAGTG GCGATGGTGT CGTCTTTTGG CGCAATTCGG TACTGGTGGC TGAATTGGCC GCGAACAGCC AGTTAACCCA TCTTTCATTG GGGCTGGATG GCGATGCTCG TTTGCTTACC GATCGCAGCT TTGTCACGCT CGCGCGTGAT GCGCGCTATC AATCGATCAA TATTCAGTTG GGCGGGCAAC TGGTCCGTCG CGACATTGAC GTCAACATCA CCGAAACCGG TGCACACTGC GATTTAATCG GCCTGATGAT GCCGCGAGCC AAGCAAGTGC TCGATACGCA CACTCGGCTG ATTCACGGTG CCGCGCACAC CACCAGCAAT GAGCAATACC AAATCATTGC CGACGAATCC GGACGTGGCA TCTTCAAGGG CCGCATTCTT GTGGCGCAGG ATGCGCAAAA AATCGAAGCG TTCCAGAACA GCCGTAATCT GCTGCTCTCG GACTCGGCCG AAATTGACAC CAAGCCAGAA CTTGAAATCT ATGCCGATGA TGTCAAATGC AGTCATGGTG CGACCATTGG CCGTCTCGAC GATGAAGCGC TGTACTACCT CAAAAGCCGA GGAATCAGTT CAGAAAATGC TCGCAAACTG CTGATTACCG GGTTTGCGCA AGAAATCGTC GATCAACTGC CCACGCCAGA ATTGGTGGAT TGGTTAGGAC AAATCATCGC TCGGCGGCTT GAACGCCCGC AAGCGAAATA G
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Protein sequence | MNRTPLPEWL ANSLTDSLGS QQQAAPGEIH TVARAQVIEW GLPTLRDEEW RWTNLRALTR PLPTSNSTAA PKNIGVMDSV PQALCIRFNA GKLVERPKEL PDGMTVTPLQ DADHAQRRAA FAPLAQNPND ALLALNTATA AEGLVIDIAP NADISQPIVI EFVDEPTDTA AQTRILLRSG VHSRATLIET ASSGDGVVFW RNSVLVAELA ANSQLTHLSL GLDGDARLLT DRSFVTLARD ARYQSINIQL GGQLVRRDID VNITETGAHC DLIGLMMPRA KQVLDTHTRL IHGAAHTTSN EQYQIIADES GRGIFKGRIL VAQDAQKIEA FQNSRNLLLS DSAEIDTKPE LEIYADDVKC SHGATIGRLD DEALYYLKSR GISSENARKL LITGFAQEIV DQLPTPELVD WLGQIIARRL ERPQAK
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