| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1192 |
|---|
| Symbol | |
|---|
| ID | 8534345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 1299375 |
|---|
| End bp | 1300874 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646383582 |
|---|
| Product | FeS assembly protein SufB |
|---|
| Protein accession | YP_003263075 |
|---|
| Protein GI | 261855792 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0017395 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG AACACATGAC TGAGCAACAG GAAATCGAAA GCCTGATGCA ACGCGAATAC
AAATACGGCT TCACGACCGA CATTGAGCAG GACATCATCC CGCCGGGTTT GAATGAAGAC
GTGATTCGGT TGATCTCGGC TAAAAAAAAC GAGCCGGAAT TCCTGCTTGA ATGGCGGCTC
AAAGCCTATC GCCATTGGCT GACCATGACC CCGCCAACTT GGGCACATGT GCATTATCCG
CCAATTGATT ATCAGGCCTT GTCTTATTAT GCCGCGCCAA AATCGGCGGC AGAACTTGCC
GAAATCGAAG CGAGCAAACC GCAAAGCCTT GATGATGTCG ATCCCAAATT GCTGGAAACC
TACGAAAAGC TGGGCATCCC GCTGCATGAA CGCGCCATTT TGGCGGGCGT CGCGCAGCCT
TCGAATGTGG CCGTCGATGC GGTATTCGAT AGCGTCTCGG TGACCACGAC ATTCAAGGCA
AAGCTGGCCG AAGCCGGGGT TATTTTCTGC TCGTTTTCCG AGGCGGTGCA CAACCACCCC
GATTTGATCA AAAAATACCT TGGCACGGTC GTACCGGCAG GCGATAACTA CTACGCGGCA
CTCAACTCTG CCGTGTTCTC CGACGGCTCG TTTGTATTTA TCCCTAAGGG CGTTCGCTGC
CCGATGGAGT TATCCACTTA TTTTCGCATC AACGCCAAGA ACACAGGCCA ATTTGAACGC
ACGCTGATCG TCGCCGAAGA AGGCGCGCAT GTCAGCTACC TCGAAGGTTG CACGGCACCC
CAACGCGATG AAAACCAACT GCATGCGGCC GTGGTCGAAT TGGTTGCATT GGACGATGCC
ACCATCAAAT ACTCCACCGT GCAGAACTGG TATCCGGGCG ACGAGCAAGG CAAAGGCGGC
ATTTACAACT TCGTGACCAA GCGCGGCGAT GCGCGCGGTA ATCGAAGCAA GATCACCTGG
ACGCAAGTCG AGGCCGGTTC GGCGATTACC TGGAAATACC CGAGCTGCAT CCTGCGCGGC
GATGATTCGG TTGGTGAATT CTATTCGGTT GCCGTTAGTA ACAATTACCA GCAGGTCGAT
TCCGGCACCA AGATGATTCA TCTAGGCAAG CGCACCCGCA GTACCATCGT ATCGAAGAGC
ATCTCGGCAG GCCGTTCGCA GAATGCCTAT CGCGGCCTGG TGCATATTGC CAAATCGGCC
GACGATGCGC GCAATTACAC CCAATGTGAT GCGCTACTGA TTGGCGATCG CAACGGGGCG
CACACCTTCC CGTACATTGA AGCCAAAAAT GCGACCGCGC AAATCGAGCA CGAGGCCACC
ACATCCAAAA TCAGCGACGA TCAGATTTTC TACCTGCAAT CTCGCGGGAT CAGTGAAGAG
AACGCGACGA ACATGATCGT CAACGGTTTT TGCAAGGAAG TGTTCAACGA GTTGCCGATG
GAGTTTGCGG TAGAAGCCCA AGCCCTGCTT GCCGTATCGC TCGAAGGTTC GGTTGGTTAA
|
|---|
| Protein sequence | MSKEHMTEQQ EIESLMQREY KYGFTTDIEQ DIIPPGLNED VIRLISAKKN EPEFLLEWRL
KAYRHWLTMT PPTWAHVHYP PIDYQALSYY AAPKSAAELA EIEASKPQSL DDVDPKLLET
YEKLGIPLHE RAILAGVAQP SNVAVDAVFD SVSVTTTFKA KLAEAGVIFC SFSEAVHNHP
DLIKKYLGTV VPAGDNYYAA LNSAVFSDGS FVFIPKGVRC PMELSTYFRI NAKNTGQFER
TLIVAEEGAH VSYLEGCTAP QRDENQLHAA VVELVALDDA TIKYSTVQNW YPGDEQGKGG
IYNFVTKRGD ARGNRSKITW TQVEAGSAIT WKYPSCILRG DDSVGEFYSV AVSNNYQQVD
SGTKMIHLGK RTRSTIVSKS ISAGRSQNAY RGLVHIAKSA DDARNYTQCD ALLIGDRNGA
HTFPYIEAKN ATAQIEHEAT TSKISDDQIF YLQSRGISEE NATNMIVNGF CKEVFNELPM
EFAVEAQALL AVSLEGSVG
|
|---|
| |