Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1190 |
Symbol | |
ID | 8534343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1297751 |
End bp | 1298452 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383580 |
Product | hypothetical protein |
Protein accession | YP_003263073 |
Protein GI | 261855790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000054875 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAC TGATGATTGC AGCGGCATTA CTGGCCACTT CGCTGCCGGC CATGGCGTCA GATCCCAAGC CCCTGACTCT GGGTGAACAG TTTATTGTTC GTGCTTATGC AGGTCAGGTT GAAGGCTTGG CGCTGAGCCA GGTCATCAAG GCCAAATCTT TGGGCATCGC CGTCAACGAC AGCACAATCT GCGTGGCATT AGCGGGAGCC ATGGCGGGCG AATTTATCGC CAACAATAAA GCTGAGGGCA TGAAGAACAC GTCCGATGCC CCGGCTCCCC GTTTGTCCAT GGTTGCCTTC AACAAACCAG ACTCAGCTGA AATGGCGGCC ACAGAGTTCA AAAACAAAGC AGCCGTCGCC CTCGTGTTCG GCGGACAGAT TGACGATCTG ACGAATGCAC TGAACGTAAA AATGTTGCTG GCGAGCCTGG CTAAAGAGCA ATACGAAGGC GCCCTTTTCC TGCATTTGAC CGTTTTTGGC AAAAAATGGG TTGAGCAAGC CGCCAAAGAG GATGCATCGA TCGCCACCTG GCTGGCTGGC AAGGACAACA TCTACGCACT GGGCGTGAAT GCCAAGGAGA AAAAAGGTAT GGTCTTGAGG GTCGGCTACC CTGAAGGCAA GCAAACCGTG ACCGGGACCG CATACACGGC TGATTTGAAC AATGGCTTTA TCAATCTGTT CAATCGTCGC CTGGCTAAGT AA
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Protein sequence | MKRLMIAAAL LATSLPAMAS DPKPLTLGEQ FIVRAYAGQV EGLALSQVIK AKSLGIAVND STICVALAGA MAGEFIANNK AEGMKNTSDA PAPRLSMVAF NKPDSAEMAA TEFKNKAAVA LVFGGQIDDL TNALNVKMLL ASLAKEQYEG ALFLHLTVFG KKWVEQAAKE DASIATWLAG KDNIYALGVN AKEKKGMVLR VGYPEGKQTV TGTAYTADLN NGFINLFNRR LAK
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