Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1187 |
Symbol | |
ID | 8534340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1293649 |
End bp | 1294287 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383577 |
Product | Sterol-binding domain protein |
Protein accession | YP_003263070 |
Protein GI | 261855787 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.044865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGGAA CCACACTGCC ATTGCCCCTC ATGCTGATGG TCGAAAAAAC CTTAAATCAG CGACTTAAGC AAGATACCTC CTCTTTGAAG CGTCTGCAAA AACTCAATGG ACTGGTTTTC GAAGTGCTCT TGCGCGATCC TTCCTTAAGT TTCTTTATTA CTTCGACGCC CGAGGGCATT TTGCTGCTCC GTCATCACGA AGCGTATGCC GACGCTCGCA TTCTAGCGAG TAGTTTTGGG CTCTTACGCG CCGCTCGCAC TGAGCACAAA ATGGATGCCC TGTTCAATGG CGACATCCAG ATCGAGGGAA ATCAGGAAGC CGCAGAATCA CTTTTGCGTA TTTTGGGCGC AATCGATTCC GACCTGTTTG CGCGTCTGGC CGACAAAATT GGCGTGGCGC CGGCGGGATT CATTGAACGC AAGATCGAGC GGTTCCGCGC TCAGGTAAAA ATCTGGCGGC AAACCCGACA ACTGGAAGCC GCTGACTTCA TGGTTTTTGA GCGTGCCTTG TTGGTTGAGC CTGAATCAAT GCGCGGGCAG CTTGATGATA TCGATTCTGT CCGGGATCGA GTGGATCGAC TGGCTGCGCG AATAGAGCGG CTGGCGGTGC GCTTTGCAAA CGACCGGGGT GCTTCATGA
|
Protein sequence | MIGTTLPLPL MLMVEKTLNQ RLKQDTSSLK RLQKLNGLVF EVLLRDPSLS FFITSTPEGI LLLRHHEAYA DARILASSFG LLRAARTEHK MDALFNGDIQ IEGNQEAAES LLRILGAIDS DLFARLADKI GVAPAGFIER KIERFRAQVK IWRQTRQLEA ADFMVFERAL LVEPESMRGQ LDDIDSVRDR VDRLAARIER LAVRFANDRG AS
|
| |