| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1179 |
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| Symbol | |
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| ID | 8534332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1283509 |
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| End bp | 1285296 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383569 |
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| Product | ABC transporter domain protein |
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| Protein accession | YP_003263062 |
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| Protein GI | 261855779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCG ATCCCAATGA TCTCTCACCG GATGTACAGG CTTTAGCCAA ACAATCACGC
CGCTTCAACC GTGCCTTTTT CGCTACCGTG TGGGCACTGG CAAAGCCGTA CTTTCTCCAT
TCTGAAGACC GCTGGAAGGC ACGCGGTTTC CTGCTAGCCA TCATTGCAAC TACCTTACTG
CTGGTGTTCA TCAATCTCCA AATCACCGAT TGGTACAACC GCTTCTACAA TGCCCTGCAA
AATTATGATC AGGCTGGGTT CTGGAAGCTG TTGGGGGAGT TTGCCTTACT GGCTTTTGGT
GCCATTGCAC TCAGCGTTTA TCAAACCTAT CTTTCCCAGT TGCTCGATTT GCGTTGGCGG
CGATGGCTGA CGGGAGATTA TTTATCCCGC TATCTGTCGG CGCAAACCTA TTACCACATG
GAAATTTTCC AGCGAGGGCA AGATAACCCC GACCAACGGA TCGCTGACGA TCTCAACCTG
TTCTCGCAGT TGACGACCAG TCTGTTAACC GGTCTCTTGA GTGCAGTCGC CAATCTGGTG
GCCTTTATCG GTTTGTTGTG GGTACTTTCT TCGAAGGTTG TCATCCCTTG GGACGGCGCC
ATGCACCATA TTCCGGGATT CCTGGTTTGG GTGGCCTTGA TCTATGCAGT CGTCTGGACC
TGGGTAGCGG CTAAAGTCGG CAACCCACTG ATTTGGCTTA ATTTCAATCA GCAGCGCCTG
CAAGCAGATT TTCGTTTCAG CCTAGTTCGG CTTCGGGAAA ACAGTGAAGC CGTGGCGTTT
TATGGTGGCG AGAACAAGGA ACAGGCGCAA TTTCATGCGC GATTCGATCG GGTGTTCGAT
AACTACAAGC GGCTGATTCT CCGACAAAAA CGATTCAACT GGTTCAGCAG TTATTTCAGT
CAGGTGGCGG TGATTTTGCC CTTTCTGGCC GCGGCGGCTG CCTATTTCAG TAAAGCTGTT
CCGCTAGGAT TTTTAATGCA GATCAGCTCG GCCTTCGGCA ATGTACAGAG CTCGTTCGCC
TACATCGCAC AAAGTTACGA CAATTTCGCC CAATGGCATG CGGTGGTCGA CCGTTTGCAT
GGTTTCAGGA ACCTGGTACA GAAAGTTGAG TTGTTGCACG AGACCGAAGT CAAAATCGAG
CACACTGCGA GCTCGGGAAA TGATGTCGTG CTCGGTGTTC ATCAGTTGTC TATTCATCTG
CCGGATGATC GTCGTTTGCT CAACCATGCC GATTTCACGC TGGGCGCGGG GGAGCGATTA
TTGATCATGG GCCGTTCCGG ATCAGGCAAA AGCACCTTGT TGCGCGCCTT GGCCGGCATC
TGGCCATTCG GTGAGGGGCG AATTGAATTG CCTGAAGGTA GCAAAACATT GTTTCTGCCA
CAAAAACCGT ATTTGCCACT TGGCAGCCTG CGTGAAGCCG TGTTGTACCC GCAAGCGGCC
CAGGATACGA GCGATGAAGT GCTTGGTACG GTGTTGAATG CAGTGGGATT GGGTGCGCTT
GTGCCAAGTC TGGATTCAAT CGAGCCCTGG TCGATGATTT TGTCACTCGG TGAGCAACAG
CGGCTCGCCT TTGCCCGAGT GCTTCTGCAG CAGCCTCGGC TCGTGTTCTT GGATGAAGCG
ACCTCAGCAC TGGATGAATC TAGTGAAACT GCACTCTACG AATTATTGAT TGCGCAAAGT
CCACAAATGA CCGTGGTCAG CGTCGGTCAC CGCTCCAGTT TGCGCCACCT GCATACCAGA
CGCTGGACGC TGGAAGATGC TCAATTCGTG GAAGCCACGG CGACCTAA
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| Protein sequence | MQLDPNDLSP DVQALAKQSR RFNRAFFATV WALAKPYFLH SEDRWKARGF LLAIIATTLL
LVFINLQITD WYNRFYNALQ NYDQAGFWKL LGEFALLAFG AIALSVYQTY LSQLLDLRWR
RWLTGDYLSR YLSAQTYYHM EIFQRGQDNP DQRIADDLNL FSQLTTSLLT GLLSAVANLV
AFIGLLWVLS SKVVIPWDGA MHHIPGFLVW VALIYAVVWT WVAAKVGNPL IWLNFNQQRL
QADFRFSLVR LRENSEAVAF YGGENKEQAQ FHARFDRVFD NYKRLILRQK RFNWFSSYFS
QVAVILPFLA AAAAYFSKAV PLGFLMQISS AFGNVQSSFA YIAQSYDNFA QWHAVVDRLH
GFRNLVQKVE LLHETEVKIE HTASSGNDVV LGVHQLSIHL PDDRRLLNHA DFTLGAGERL
LIMGRSGSGK STLLRALAGI WPFGEGRIEL PEGSKTLFLP QKPYLPLGSL REAVLYPQAA
QDTSDEVLGT VLNAVGLGAL VPSLDSIEPW SMILSLGEQQ RLAFARVLLQ QPRLVFLDEA
TSALDESSET ALYELLIAQS PQMTVVSVGH RSSLRHLHTR RWTLEDAQFV EATAT
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