| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1163 |
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| Symbol | |
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| ID | 8534315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1264434 |
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| End bp | 1265567 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646383552 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003263046 |
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| Protein GI | 261855763 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00317162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATTCA TCGATAGCAC TTCCGCGAAA AAATTGCCGG GTGTCGCCGC CCTCCTCGCC
ATTGCATCCG TTCTCTCCGC TTGCGGAGGG CACGATGAGC ATCCGGCTTC GGCAACACAA
CTCGAAATGA AAACTCAGGC CGAACTGTTC AAGGTGCATG ATCAGTCCTT GCCTGTTTTT
GCGCTGTTTC CAGGTTCGGT GATCACTTCG GATCAGATTT CGATTTCATC GCGAGTCATG
GGCTATGTGC GTAGCGTGGA TGTTCATGAA GGGCAGACGG TCAAAACCGG CGAGACGTTG
CTCACCATCG ATTCCACTGA TGTTACTGGT GCCATCAACC AGGCACGAGC CGAAGTCAAC
AAGGCCCACG CTGCCTTATC AGACGCAAAA AACAACTATG ATCGCTACTC ATCGCTGTAT
AAGGAAAATG CTGTTCCAAA GCAGATGTAC GAGCAGATGC AAACGGCATA TAAGGTCGCT
CAAAGCAATT ACTCTGCGGC ACAAGCCGGG TTGAAGCAGG CCGAGTCTCA ACTCACGTAC
GTTAAAATTT CGGCCCCGTT CAGCGGCACA ATCACCAGTC GGATGGTCGA TTCCGGCCAA
ATGGCGTCCC CGGGAATCCC GTTACTGACC TTGCAAGGCA GTGGTCAGAA ACAAGTTGAA
GTCCAGCTCA CCAGCCAGGC ATTCGCCACT TTGAAGCTTG GAGAGCCCGT CACCGTCCGC
TACACGGATT TTCAAGGTGA ACAACACGAG TTTCAGGGCC TTGTTGAACG CATGGTCGAT
GCCACTGACC CCGTAACACA CACGCACACG GTTAAGATCG GCGTGCCGGA AAGCGTCAAC
GTGCGCAGCG GTAATTACGT TGTGGTGGAG ATCGCTGTGG CGCATGAAAC CGGGATGTTG
GTTCCCCTTT CAGCAATCCA CGATCGCGGC GGGATACGTG GCGTGTTCGT GCTTGATGAT
CAAAACCGTG CGTGGTTCCG AATGGTACGC CTGGGCCATG TGATTGACGG CAAACAAGTG
ATTCTGTCCG GCCTCGTGCC GGGTGAACGG CTCGTAACCA AATCCGATGA TCGCCTGCAA
AACGGTATTG TCGTGACCAA TGCATCTGCT GACAAAGAAC AACCTGCATC ATGA
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| Protein sequence | MSFIDSTSAK KLPGVAALLA IASVLSACGG HDEHPASATQ LEMKTQAELF KVHDQSLPVF
ALFPGSVITS DQISISSRVM GYVRSVDVHE GQTVKTGETL LTIDSTDVTG AINQARAEVN
KAHAALSDAK NNYDRYSSLY KENAVPKQMY EQMQTAYKVA QSNYSAAQAG LKQAESQLTY
VKISAPFSGT ITSRMVDSGQ MASPGIPLLT LQGSGQKQVE VQLTSQAFAT LKLGEPVTVR
YTDFQGEQHE FQGLVERMVD ATDPVTHTHT VKIGVPESVN VRSGNYVVVE IAVAHETGML
VPLSAIHDRG GIRGVFVLDD QNRAWFRMVR LGHVIDGKQV ILSGLVPGER LVTKSDDRLQ
NGIVVTNASA DKEQPAS
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