| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1161 |
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| Symbol | |
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| ID | 8534313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1261738 |
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| End bp | 1262553 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383550 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003263044 |
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| Protein GI | 261855761 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0226119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGCA TCGCGCTCAC TCTTGAATAC GACGGTTCCA GATATCATGG TTGGCAGCGC
CAATCGGAGG TCGACTCAGT CCAGGCACGG CTTGAAACGG CGTTATCTCG GGTCGCTGAT
TCGCCGGTAG ACGTCGTATG TGCCGGGCGC ACCGATGCGG GTGTGCATGC CAGTCATCAG
GTTGTTCATT TTGATACGGA AGCGATTCGT CCCGAACGAG CATGGTTGCT TGGCGTCACT
CAGTCACTGC CATCTGATAT AAGTATCTTG TCTGCCCAGT TTGTTGACCC TGAGTTTCAT
GCCCGATTCA GTGCCACCGC GCGGAGTTAT CGCTACATTA TCCTGAATCG GATGACGCGC
TCTGCTTTGC ATCGCGGTCG AATCACCTGG TGGCGCGGTC CGCTGGATGA GAGCGCCATG
CACGAGGCCG GGCAGCATCT ACTGGGCGAA CATGATTTCA GTAGCTTTCG CGCTAAGGAT
TGCCAATCCG TCAGTCCCGT TCGCTCCATC GAGTCCTTGA ATATTCATCG ACAAGGCGAA
TATGTGTATA TGGATATCAC GGCAAATGCC TTCTTGCACC ATATGGTTCG GAATATCGTC
GGCACGCTAT TGCCGGTAGG GGCGGGCGAG CGACCTGCGG ATTCGCTTTG GGATATTCTT
CAGGCCAAAG ATCGTTCTGC TGCGGGCATG ACCGCGCCCG CGGATGGGCT GTATCTGGTC
GGTGTGCGCT ATCCCGATTC GTTTGGTATC AAGCACGCTG GGGCAAAACC GGTATTTTGG
TCCTCATGCC GCGAAATGCA GTCGGGTTGC TGCTAG
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| Protein sequence | MARIALTLEY DGSRYHGWQR QSEVDSVQAR LETALSRVAD SPVDVVCAGR TDAGVHASHQ
VVHFDTEAIR PERAWLLGVT QSLPSDISIL SAQFVDPEFH ARFSATARSY RYIILNRMTR
SALHRGRITW WRGPLDESAM HEAGQHLLGE HDFSSFRAKD CQSVSPVRSI ESLNIHRQGE
YVYMDITANA FLHHMVRNIV GTLLPVGAGE RPADSLWDIL QAKDRSAAGM TAPADGLYLV
GVRYPDSFGI KHAGAKPVFW SSCREMQSGC C
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