| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1128 |
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| Symbol | |
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| ID | 8534276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1225820 |
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| End bp | 1227442 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646383513 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_003263011 |
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| Protein GI | 261855728 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.556203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTA ACGTAAACCT TGCGCCCCAT TCGTTTGATC AAATACTGGC TCTGCTGGTG
TTTCTTCCCG TACTGAGCGC CATTGCATTG ATAGCCTTGC ACCGTGCCGG TTGGCGCCTG
AAGCGTCTAA TCAGCGCAGC CAGCGTCGGT GTTCTGCTGC TGGCGACGAT ATATCTGATG
GTCAGCGGCG CGGGCAACAC GCCACAGGTT TATCCCATGG GCGATTGGCC TGCGCCATTC
GGCATCGTTT GGGTGTACGA CCGGCTTTCC GGTCTCATGT TGCTCCTGAC GGCGATTCTC
GGTGTCGTTA GCCTCACTTA CGCCATCGCC ACGAATGAAG ATCACAACGG CGCTCATTTC
CACGCGCTGT TCCAGGCTCA ATTATTCGGT CTGAACGGCG CCTTCCTCAC CGGAGATGTG
TTCAATCTGT TCGTGTTCTT CGAAGTGCTC TTGCTGGCCT CCTACGGACT GATGCTTCAT
GGCGGAGGGG CTGCGCGAAG TAAGGCCGGG TTGCATTACA TGGTCATCAA TCTGGTGGGC
TCGACCCTGT TCCTGTTCGC TGTGGGGGCG CTGTATGGCG TTCTGGGCAC GCTGAATCTT
GCCGATCTGG CCGTCAGAAT TGGTCAGGCA CCCAGCAGCC TGTACGGGGT CATCGCCGCT
GCCAGTCTGA TGCTGTTTGT GGTATTTGCC ATCAAGGCCG CTGCATTTCC GCTGTATTTA
TGGCTGCCCG GCACTTATGC CGAAACATCA GCACCGGTCG CCGCCTTGTT TGCCATCATG
ACCAAGGTCG GGTTGTATGC AATGCTCCGT GTTCACGGCA CGTTATTTGA TACCTCTACT
GCACCGGCCA GTTTGGTACA TCTCATCGGC CCGTGGGAGC TTTGGTTGGG GATCATGACA
CTCATCATGG CCACGCTGGG CGTACTGGCG GCAATGAATC TCCGCCGCCA AGTCGCTTAC
CTGATTTTGG CTTCTGTGGG CACGCTGTTG ATTGCATTGG GTGTGAATAC CACCGAGTCC
ATTGAAGCCG CGCTCTATTA CTGGATACAT ACCACCCTGC TATCCGCAGG TTTCTTCCTG
CTGGCCGACA TTGTTCGAAG AAGTCGCGGT GATGATGGTT GGCGTATCCA CCCTGCGATG
CCGAGAGCCA CGTTGATCGG TGGACTGTTC TTTATCTACG CGATGGGTAT GGCGGGTTTG
CCCCCCTTAA CCGGCTTCTT CGGCAAGACA ATGATCTTGC ATTCGGTATT GGGTTCTCCC
TTGATGGGTG CGATTTTCGC GGTGGTTCTG ATCACCAGTG TGCTTCTGGT TATTGCGCTA
GCACGGAGTG GCAGCACGCT GTTCTACCGT GTGGATCATC AGGAGCAACA GGTTACGGCG
CAGACAGTCT CTTCATTTGC CTGGTTGGCT GTGTTCACGC CTTTGATTCT TGCGGCGGCG
ATGGTGATTT TTGCACTGCA ACTGACCGTT TGGTTGCACA ACACAAGCAT GCAGATCAAG
GATACTTCCG TGTGTATCCG TCAAGCTCTG GATCCGGCCG TGTCTCGTCT GCACACAGAA
GAACCGAAAC AGCCCAATCC AGCGGATGTA TCACCCCACT TTCCATCGGT TAATCAAGAA
TGA
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| Protein sequence | MTPNVNLAPH SFDQILALLV FLPVLSAIAL IALHRAGWRL KRLISAASVG VLLLATIYLM
VSGAGNTPQV YPMGDWPAPF GIVWVYDRLS GLMLLLTAIL GVVSLTYAIA TNEDHNGAHF
HALFQAQLFG LNGAFLTGDV FNLFVFFEVL LLASYGLMLH GGGAARSKAG LHYMVINLVG
STLFLFAVGA LYGVLGTLNL ADLAVRIGQA PSSLYGVIAA ASLMLFVVFA IKAAAFPLYL
WLPGTYAETS APVAALFAIM TKVGLYAMLR VHGTLFDTST APASLVHLIG PWELWLGIMT
LIMATLGVLA AMNLRRQVAY LILASVGTLL IALGVNTTES IEAALYYWIH TTLLSAGFFL
LADIVRRSRG DDGWRIHPAM PRATLIGGLF FIYAMGMAGL PPLTGFFGKT MILHSVLGSP
LMGAIFAVVL ITSVLLVIAL ARSGSTLFYR VDHQEQQVTA QTVSSFAWLA VFTPLILAAA
MVIFALQLTV WLHNTSMQIK DTSVCIRQAL DPAVSRLHTE EPKQPNPADV SPHFPSVNQE
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