Gene Hneap_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1121 
Symbol 
ID8534269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp1220822 
End bp1221505 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content55% 
IMG OID646383506 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_003263004 
Protein GI261855721 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000378103 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA GCATTGCCTA TGAGGATTAC CTCAAAGCCA TTTTCAAGCT AGCCGAACAA 
CGTAGCGATT CTGCGGCGAG TACTTCAGCC ATTGCCGAGC GGCTCAATAT TGCACAGGCA 
TCCGTAACTG CAATGCTCAA ACGATTGAGT CACGACGGAT TGATCGAATA TGAGCGCTAT 
CAAGGCGCGC GGCTGACATC TGCTGGAGCG GCAATCGCCA TCGACATGAT TCGCCGACAT 
CGCGTGATCG AGACATTTCT GGTGCGGGAT CTCAATGTGC CGCTGGCTGA TGTGGATGCC 
GAAGCGGAAA TTCTGGAACA TGCCTTTTCC AGCGCTCTGA TCGACCGCTT ATGGGCGCAT 
CTTGGCGAAC CTGAGTTCGA TCCGCACGGC GCGCCGATTC CCGCGCCTGC TCAAGCACCA 
ATTGAACGGC GCGATCTCAC CGCACTTTCA GAGCTTGTTC CCGGTGATCA GGCGACAATT 
GTGCGCTTGG CAGCGCAAAA CGCGGGGCAG TTGCGAATGT TGACGCAACT TGGGTTGGTT 
CCGGGACAAG TCATCAAGCG CAGTGCCGCT CCCATCGGCG CCAGTGACGT TTATCTGCAA 
ATAGATAAGC AATCACGGGC TTTGAATCCG GCACTCGCCG ATGCCGTATG GGTGCTGTGC 
CCGGGAAAAT CCGGTACTGA ATAG
 
Protein sequence
MKTSIAYEDY LKAIFKLAEQ RSDSAASTSA IAERLNIAQA SVTAMLKRLS HDGLIEYERY 
QGARLTSAGA AIAIDMIRRH RVIETFLVRD LNVPLADVDA EAEILEHAFS SALIDRLWAH 
LGEPEFDPHG APIPAPAQAP IERRDLTALS ELVPGDQATI VRLAAQNAGQ LRMLTQLGLV 
PGQVIKRSAA PIGASDVYLQ IDKQSRALNP ALADAVWVLC PGKSGTE