| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1119 |
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| Symbol | |
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| ID | 8534267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1216949 |
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| End bp | 1218451 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646383504 |
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| Product | cytochrome c oxidase, cbb3-type, subunit I |
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| Protein accession | YP_003263002 |
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| Protein GI | 261855719 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.549677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTTACT TTTATAAAAC CAAACCGAAC TGGGGGTATT TGATGAACGC ATCATCCGCA
ACCATGCCCA GCGGTGCATC CTATGACTAT GACATCGTTA AGATGTTCAC CATTGCCTCA
ATTGTTTGGG CTTTAGTCGG GATGGCCGCT GGCCTTTATA TCGCAGGTGA ACTGGCTTGG
CCTGCCTTGA ATCTCGATAT TGCAGAAATC ACCTTTGGTC GATTGCGACC GGTGCATACC
AATACAGTGA TCTGGGGTTT CGGTGGAAAT GCGTTGATCG CCACTTCGTT TTACGTCGTG
CAACGCACGT GTCAGACGCG TCTTTGGGGC GGTAAATACC TTCTCAACAC CATGTTCTGG
GCTTGGCAGG CAGTCGTGCT TATTGGCGCT TGGGCCCTAA TGGCGGGGCA TAGCCAAAGC
CGTGAATATG CCGAGTATCC TTTGGTCGAC AACATCTTGA TGATGATTGG CTTGGTTATT
TATGCCGTTG TGTATGCCAA CACGCTCCGA CGCCGTTCTC AGCCACACAT TTACGTGGCT
AACTGGTTTT ACATGGCCTT TATCTTGGCG ACGGCCATTT TGCACTTTTT CAATAACTTG
CAGGTGCCTT ATTCCCTTTG GCAGTCGTAT TCGGTATTTA GCGGCACACA GGATGCAATG
ACCGAATGGT GGTACGGCCA TAACATCGTG GGGTTTGTAC TGACTGTCGG CTTTTTGGGG
ATGATGTATT ACTTTGTGCC CAAGCAATCC GGCAGGCCCA TCTTCTCCTA TCGCTTATCT
ATCGTGCATT TCTGGGCCTT ATCGTTTTTG TACATGTGGG TTGGTGGCCA CCATCTTGAA
TGGACTGCAT TGCCAAACTG GATCAACTCG CTCTCGGTTG CCTTCTCGAT TTTATTGTTG
TTGCCATCAT GGGGCGGGAT GATCAACGGC ATCATGACCC TCTCTGGTGC CTGGGAGAAA
CTGCGAACTG ACCCGATTAT CCTGTTCCTG GTTACGGCAC TGGCCTTCTA CGGCATGGCG
ACCTTTGAAG GGCCAATGCT CGCCCTGCAA TCGGTCAATG CACTCTCTCA TTACACTGAC
TGGACGATCG GCCACGTGCA CTCAGGCGCA TTGGGTTGGG TCGCCTTGAT CACCTTCGGT
TCGTTCTACC ACATGGTTCC TCGCCTATGG GGAACCCGCC TGTACTCCAC GCGTCTGGTA
TTCGTTCATT TCTGGCTTGC GACCATCGGG ATCGTGCTGT ACGTCGTTGC GATGTGGGTT
TCCGGCATCG GGCAGGGATT AATGCTGCGT GCTTTCGATC AATACGGCAA CCTGGCCTAT
ACCTTTGTTG AGACGGTTGT GTTCCTACAT ATTCCGTATA TTGTCCGCTT CATCGGCGGT
GCTTTCTTCC TGAGTGGTAC CATTTTGATG GTATATAACC TGTATAAAAC CGTTGTCTCT
GAGCGCGTGA CCGAAGTTGA GCGCGAAGTG ATGATTCCAG GGAAACTAGC TTCTTCTCAT
TAA
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| Protein sequence | MGYFYKTKPN WGYLMNASSA TMPSGASYDY DIVKMFTIAS IVWALVGMAA GLYIAGELAW
PALNLDIAEI TFGRLRPVHT NTVIWGFGGN ALIATSFYVV QRTCQTRLWG GKYLLNTMFW
AWQAVVLIGA WALMAGHSQS REYAEYPLVD NILMMIGLVI YAVVYANTLR RRSQPHIYVA
NWFYMAFILA TAILHFFNNL QVPYSLWQSY SVFSGTQDAM TEWWYGHNIV GFVLTVGFLG
MMYYFVPKQS GRPIFSYRLS IVHFWALSFL YMWVGGHHLE WTALPNWINS LSVAFSILLL
LPSWGGMING IMTLSGAWEK LRTDPIILFL VTALAFYGMA TFEGPMLALQ SVNALSHYTD
WTIGHVHSGA LGWVALITFG SFYHMVPRLW GTRLYSTRLV FVHFWLATIG IVLYVVAMWV
SGIGQGLMLR AFDQYGNLAY TFVETVVFLH IPYIVRFIGG AFFLSGTILM VYNLYKTVVS
ERVTEVEREV MIPGKLASSH
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