Gene Hneap_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1116 
Symbol 
ID8534264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1213133 
End bp1214095 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID646383501 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003262999 
Protein GI261855716 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTACCA GTAAATTCAC TTTGGATGGT GCCTTGTTCC GCAAGGTGGC TAGAGCGGTT 
GGCTTGCCGG TCGTAGGCAT CGCTGTGTTT CTTGTGTTCT GGGCCGTGGT GGCCGATCAC
ATTCACACGT CGCTGGGCAC GTTCCCAGGG CCGGAGGCGG TGGCCGTGCA ATCTGAAAAC
CTTTATCAGG ATTATCAGCA GGCTCAGGTG AAAAAAGCGC AGTTTTACCA GATGCAAGAA
GAGCGCAATG CCAAATTGGT GGCAGAAAAC CCAAACTACA AGGCGGTGAT TTACCCGTAC
ACGGGGCAAC CGACGTTCGT CAGCCAGATT GGAACCAGTT TGGTTACCGT GCTTTCGGGC
TTTATTCTGG CCTCTTTAAT CGCGATACCG TTGGGCATAG CGATTGGTTT GTCATCCAGC
CTGCACGCGG CGGTGAACCC CATCATCCAG ATTCTCCGAC CCGTTTCGCC TCTGGCCTGG
CTGCCGTTGG TCACCATCGT GGTGAGTGCG CTGTATGCCA GCAACGATCC GATGTTCTCG
AAATCCTATC TGGTGTCGAT GATCACGGTA CTACTGTGCT GCCTGTGGCC GACAATCATC
AATACCGCTG TGGGTGTAGC AGCCATTTCG CAAGATTTGA CCAATGTGTC GCGCGTGTTG
CGCCTGAACT GGTGGACGCA TGTGCGCAAA ATCGTGGTGC CTTCAGCTTT GCCGATGATG
TTTACCGGCC TGCGTCTGTC TTTGAGCATC GCTTGGATGG TGTTGATTGC CGCTGAGATG
CTGGCGCAGA ACCCGGGGCT GGGCAAGTTC GTATGGGATG AGTTCCAGAA CGGGTCTTCC
GATTCCCTGA GCCGGATTAT GGTGGCGGTG GTTGTGATCG GCCTCATCGG CTTCATGCTC
GATCGCACCA TGTTGCTGCT GCAGCGCTGG ATTTCCTGGG ACAAGAAATC AGTTTTGCGC
TGA
 
Protein sequence
MSTSKFTLDG ALFRKVARAV GLPVVGIAVF LVFWAVVADH IHTSLGTFPG PEAVAVQSEN 
LYQDYQQAQV KKAQFYQMQE ERNAKLVAEN PNYKAVIYPY TGQPTFVSQI GTSLVTVLSG
FILASLIAIP LGIAIGLSSS LHAAVNPIIQ ILRPVSPLAW LPLVTIVVSA LYASNDPMFS
KSYLVSMITV LLCCLWPTII NTAVGVAAIS QDLTNVSRVL RLNWWTHVRK IVVPSALPMM
FTGLRLSLSI AWMVLIAAEM LAQNPGLGKF VWDEFQNGSS DSLSRIMVAV VVIGLIGFML
DRTMLLLQRW ISWDKKSVLR