| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1114 |
|---|
| Symbol | |
|---|
| ID | 8534262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1208623 |
|---|
| End bp | 1211061 |
|---|
| Gene Length | 2439 bp |
|---|
| Protein Length | 812 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646383499 |
|---|
| Product | nitrite reductase (NAD(P)H), large subunit |
|---|
| Protein accession | YP_003262997 |
|---|
| Protein GI | 261855714 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCC CCCGCCTGAT TGTGATCGGA AACGGCATGG CCGGTATGCG CACCGTCGAA
GAGTTGTTGA AACTCAAACC TGACCTGTAT GACATCACGG TTTTCGGTGA TGAGCCCTAT
ACCAACTACA ACCGCATTAT GCTCTCGCCG GTTTTAGCCA AGGAGCAGAC GATTCCAGAC
ATCATCCTTA ACGATGAGAA CTGGTATGCA GAACACGGCA TCACCCTGCA TAAAGGGGTT
CGAGTCGAGC GAATCGAGCG TAAAAAGCTC GAAGTCATCA CGCAAGATGG TCAGGCGCAT
CCGTATGATC GAGTGTTGAT CGCGACTGGG TCGCGGGCGT TCATTCCGCC CCTGCCCGGT
GCTGATCTGC CGGGCGTGGT GGGATTCCGC AGCATTGCCG ATGTGGACAC CATGTTGGCC
GTGTGTCGCG AAGGCGGTCA TGCGGTGGTA ATTGGCGGCG GTCTGCTCGG CTTGGAAGCC
GCTGCCGGGC TGGTTTCCCA CGGCATGAGT GTCACTGTTC TGCATCGCAA CGGCAATGTA
ATGGATCGCC AGCTCGACGG CGTGGCGGGT CGTATTCTGG AAAAAACTCT GGAAGACCGC
GGCATCAGCA TCCGCCTGAA TGCGCATACC GCCTCGCTGC ACGGTACGGA TCGGGTCGAA
TCCGTTCGGC TCAAAGATGG CACCGAACTG CCCGCAGATC TGGTGGTGAT GGCCGCGGGG
ATTCGCCCGA ATATCGATGT GGCGCTCAAT AGCCGCATTT ATTGCGAAAA CGGCATCGTG
GTCGATGACA CCCTGCAAAC CTATGATCCG AAGATCTACG CGGTCGGCGA ATGCGTGCAG
CATCGCAAGG AATGCTATGG CCTGGTTGCC CCGTTGTTCG AGCAGGCGAA GGTCTGCGCG
AATCATTTGG CGCTGTACGG CATTGCAAAA TATACCGGCT CGATGACCTC GACCAAACTC
AAGGTCACCG GCGTGGACGT GTTCTCCGCC GGAGAAATTC AAGCCAAGCC CCACCACGAA
GAAATGGTGT TGGCCGATGC CACACGGGGC GTTTATAAAA AACTCATTCT GAACAACAAC
ATGATTGAGG GCGCGGTCAT GGTGGGCGAC ACCATGGACG GCGCATGGTA TTTCCAGCTC
ATGCGCGACA AGACCGATGT AACGGCCCTG CGCGATCATC TATTGTTTGG TCAAGCGCAT
GTCGGCGATG CGGGCCACGG GGCGAAAGCG CGGGTTGCCA GCCTGCCCGA TTCTGCCGAA
ATTTGCGGCT GTAACGGCGT GTGCAAGGGG GATGTGGTCA AGGCCATCAA GGAACATAAA
CTCTTCACGC TCGATGAGGT GCGGGCGCGC ACCAAGGCGT CAGCGTCCTG CGGTTCATGC
ACGGGCCTGG TTGAAGATTT ACTGGCTTCG ACCCTCGGCG GCGATTACTC CGCCGCGCCC
TCGGTCAAGC CCATGTGCGG CTGCACCGAT GCCACGCACG ATGAAGTTCG CACCGGCATC
ATCCGCCACG AACTCAAAAC CATTCGCGCG GTGTTCGATC AATTTTCCTG GAAAACCGAA
GACGGCTGCG CCAAGTGCCG CCCGGCGCTG AACTACTACC TGCTCTGTGC CTGGCCCGAT
ACCTACCAAG ATGACGCGCA ATCGCGTTTC ATCAACGAGC GCGTCCACGC CAACATCCAA
AAGGACGGCA CCTATTCGGT CATTCCTCGC ATCTGGGGCG GGGTTACCTC GCCGTCTGAA
CTCAAAGCCA TTGCCGAAGT CGCCGAGCGC TACGAAATCC CCACGGTGAA ATTCACCGGC
GGGCAACGAC TGGATTTGCT GGGCGTAAAA AAAGAGCAAC TACCCCATGT TTGGCGTGAT
TTAAGTGCCG CCGGGTTTGT CTCAGGTCAC GGATACGGCA AGGCGCTGCG CACCGTGAAA
ACCTGCGTCG GTAAGGAATG GTGCCGCTTC GGTACGCAGG ATTCCACCGC GCTGGGCATT
CGCTTAGAGC GGCTCACTTG GGGTTCCTGG ATGCCGCATA AATTCAAGAT TGCCGTTTCC
GGCTGCCCGC GTAATTGCGC CGAAGCCACA GTGAAAGACC TCGGCATAGT CTGTGTGGAT
TCCGGTTTCG AGCTGCATGT CGGCGGCAAT GCGGGCATCA AGGTGCGCGT GACCGATTTT
CTCTGCAAGG TGTCCACCGA AGATGAAGTG GTCGAATACA CCCAAGCCTT CATCCAGATG
TATCGCGAAG AAGCGCATTA CCTCGATCGC ACCGCGCCGT GGATTGAGCG CGTCGGCCTG
CCCTACATCC AACGCCGTTT AATTGAAGAC CCGGCCGGTC GCAAAGAACT GGCTGAACGG
TTTATCCACT CCCAGCAGTT TTCACAAATC GACCCATGGG TTGAACGCGC CGAAGGCAAA
GACGCGCATG AATTTGCCGA ACCGCTGGTT CTGGCGTGA
|
|---|
| Protein sequence | MIRPRLIVIG NGMAGMRTVE ELLKLKPDLY DITVFGDEPY TNYNRIMLSP VLAKEQTIPD
IILNDENWYA EHGITLHKGV RVERIERKKL EVITQDGQAH PYDRVLIATG SRAFIPPLPG
ADLPGVVGFR SIADVDTMLA VCREGGHAVV IGGGLLGLEA AAGLVSHGMS VTVLHRNGNV
MDRQLDGVAG RILEKTLEDR GISIRLNAHT ASLHGTDRVE SVRLKDGTEL PADLVVMAAG
IRPNIDVALN SRIYCENGIV VDDTLQTYDP KIYAVGECVQ HRKECYGLVA PLFEQAKVCA
NHLALYGIAK YTGSMTSTKL KVTGVDVFSA GEIQAKPHHE EMVLADATRG VYKKLILNNN
MIEGAVMVGD TMDGAWYFQL MRDKTDVTAL RDHLLFGQAH VGDAGHGAKA RVASLPDSAE
ICGCNGVCKG DVVKAIKEHK LFTLDEVRAR TKASASCGSC TGLVEDLLAS TLGGDYSAAP
SVKPMCGCTD ATHDEVRTGI IRHELKTIRA VFDQFSWKTE DGCAKCRPAL NYYLLCAWPD
TYQDDAQSRF INERVHANIQ KDGTYSVIPR IWGGVTSPSE LKAIAEVAER YEIPTVKFTG
GQRLDLLGVK KEQLPHVWRD LSAAGFVSGH GYGKALRTVK TCVGKEWCRF GTQDSTALGI
RLERLTWGSW MPHKFKIAVS GCPRNCAEAT VKDLGIVCVD SGFELHVGGN AGIKVRVTDF
LCKVSTEDEV VEYTQAFIQM YREEAHYLDR TAPWIERVGL PYIQRRLIED PAGRKELAER
FIHSQQFSQI DPWVERAEGK DAHEFAEPLV LA
|
|---|
| |