Gene Hneap_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1110 
Symbol 
ID8534258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1203101 
End bp1203934 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content56% 
IMG OID646383495 
Productformate/nitrite transporter 
Protein accessionYP_003262993 
Protein GI261855710 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGC AAATGTCCAC CGATTACGTC AAACCGAACG ATCTGGCCAA AGCCATGGTC 
GATGCGGGTG AATCCAAGGT TCTCCTTTCC ACCCGCGATA CCCTGATCCG TGCCTACATG
GCCGGTGCCA TTTTGGGTCT GGCCGCCATG TTCGCCATCA CCGTTACGAT CAACACCGGT
TCACCGTTGA CGGGCGCAAT CCTGTTCCCG GTCGGATTTA TTCTGCTTTA TCTGCTGGGT
TTTGATTTGC TCACCGGCGT GTTCATGCTG GTGCCGCTGG CCTTGCTTGA TAAGCGCCGC
GGCGTGACCG TCAATCAAGT GCTGCGCAAC TGGGGGCTGG TGTTCATAGG GAACTTTGCC
GGTGCAGTCA CGGTCGCTTT CATGATGGCC TTTATTCTTA CCTTCGGTTT TACCGTGAGC
GCTGGGGCCG TGGCAGAAAA GGTGGGGCAC ATCGGTATGA CGCGCACCTT GGGCTATGAA
TCACACGGCA TCATGGGCTG GTTCACCATC TTCGTCCGCG GGATTCTGTG CAACTGGATG
GTCTCGACCG GCGTAGCCGC CGCGATGCTC TCGACCTCGG CCATCGGCAA GATTTTTGCC
ATGTGGATGC CGATCATGCT GTTCTTCTAC ATGGGTTTCG AGCACTCGGT GGTGAACATG
TTCCTATTCC CGTTCGCGCT GATTATGGGC GGCGATTTCA CCTTCGGTGA CTACCTGTTG
TGGAATGAAT TGCCGACTGC GCTGGGCAAT CTGGTTGGTG GCCTGCTGTT CGTCGGTTTG
ATGATGTACG TCACCCACTA CAAAACCGCG CCAAAACGCG AATTGTCGCT GTAA
 
Protein sequence
MSEQMSTDYV KPNDLAKAMV DAGESKVLLS TRDTLIRAYM AGAILGLAAM FAITVTINTG 
SPLTGAILFP VGFILLYLLG FDLLTGVFML VPLALLDKRR GVTVNQVLRN WGLVFIGNFA
GAVTVAFMMA FILTFGFTVS AGAVAEKVGH IGMTRTLGYE SHGIMGWFTI FVRGILCNWM
VSTGVAAAML STSAIGKIFA MWMPIMLFFY MGFEHSVVNM FLFPFALIMG GDFTFGDYLL
WNELPTALGN LVGGLLFVGL MMYVTHYKTA PKRELSL