| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1106 |
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| Symbol | |
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| ID | 8534254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1198505 |
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| End bp | 1200355 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383491 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_003262989 |
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| Protein GI | 261855706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGC AGGTTGTCCA GCACGAAGAC CAACACAATG TTAAAAAAGA TACGGGCACG
GAGAGTGTGC TGACAATCGC GGGTTGGTTG GATCGATGGA AAACCAATCC CCAAGCGGCC
GCTCGTGATC TGCTTGATCG GCAGCAAAAA CGTATTGCCA AGTGCGCAGC GGGAAAAACC
CCACAATGGA TCCATCTTGT CGCGCTGGAT GTGCTTGAAG CACAAATTAA CGAACTTCTG
AAGACGGACG CAAACGACCT GCCGCTTTAC GGGGTACCGT TTGCCGTCAA GGACAACATC
GATGTTGCGG GCATGCCGAC GACCGCAGGT TGTCCTGAAT ATGCCTACAC GCCAGATTCG
GATGCCTTTG TTATCGCCAA GCTCAAAAAG GCCGGTGCCA TCTGTATCGG TAAAACCAAT
CTAGATCAAT TCGCGACGGG CCTAAACGGA ACGCGCACGC CCTATTCCAT TCCCCATTCG
GTGTTCAGTG AGGCGCATAT TTCCGGCGGT TCTAGTTCCG GTTCGGCGGT GGCGGTGGCG
CTGGGTGAAG TGGCCTTTTC ATTGGGTACA GATACGGCCG GTTCAGGTCG AGTCCCGGCC
GGCTGCAACC AACTGGTGGG GTTGAAACCG AGCAAGGGGT ATATCAGCAC GAACGGTTTA
ATCCCGGCGT GCCGCACACT CGATTGCATT TCGATCTTCG CGCATACGGT GGACGATGCC
CAAAACGTGC TCGCCGTCGC CGGTGTTTAT GACCCAGAAG ATCCTTATGC GCGGCAAGCC
CAACCGGCCG TGACATCTTT TTCGAGCACG AATCTTAAGC TGGCCACGTT CAGCAATTTA
AGTTGGTTTG GCGATACGCA GCAACAGGCC GCCTGGAATG CCTATGTCGC ACAACTGGCT
GCACGGGGCA TCACGCTGAC GGAAATCGAT CCGACGCCTT TTTTTGCATT GGCACCGCTG
CTCTATAACG GTCCTTGGGT GGCCGAGCGT TTGGCCGCGC TTTCTGAGTT TGTGGCAGAG
CAACCCGAGG CCATCCACCC CGTGGTGCGC GAAATCGTGC TTTCCGGTAA AAAATTCTCC
GCCGTCGATA CGTTCAATGC CGAATACCAA CGAGCGGATT TGGCAAGGAA AATCCAACAA
GCCCTGTCTG AGTTTGATGC GCTGATGGTG CCAACGGCAC CGATTTTCCC CACGATTGAA
GCCCTATTGG CCGAGCCGAT CAAACTCAAT TCCGAACTCG GCACCTACAC CAACTTTGTC
AATCTAGCTG ATTTATCCGC GTTGGCTGTG CCCGCCTGTT TGCGTGATGA CGGACTGCCG
TTCGGTATCA CCCTGATTGC CGAAGCCTGG GCCGACGCCC GATTGGCCGC CATTGCCAAA
CAGTTGAACC AGGAACAAGC GACCATCCCG CCCCTGCGCC ATGATGAAAT TGAGCTCGCC
GTTGTGGGGG CGCACCTGAC GGGCATGCCG CTGAATCACC AGTTAACGAA CCGAGGTGGT
CGCCTGCTCG AACAAACCAC CACGGCCGCG TCTTATAGAC TCTATGCTCT TGCCAATACC
ACACCACCCA AGCCGGGCCT GGTGTTCGAT ACCGAAGGCG ATGAAATCAT CGTTGAAGTG
TGGGCACTCC CGCGCACTGC TTTGGCCGAC TTTATTCAAG AAATCCCGCC ACCGCTGGGC
CTCGGCAGCC TTACGCTCGT CGATGGACGG CAGGTGACCG GGTTTATCTG TGAACCACGC
GCCCTGCAGG ACGCAAAAGA CGTGACGGCA TTTGGCGGCT GGCGACCCTA CATCGCCTCC
CGTCAATCTG CGCCATTGGC TCCCCAACCA AAAGGAATTA CGCATGCCTG A
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| Protein sequence | MQKQVVQHED QHNVKKDTGT ESVLTIAGWL DRWKTNPQAA ARDLLDRQQK RIAKCAAGKT
PQWIHLVALD VLEAQINELL KTDANDLPLY GVPFAVKDNI DVAGMPTTAG CPEYAYTPDS
DAFVIAKLKK AGAICIGKTN LDQFATGLNG TRTPYSIPHS VFSEAHISGG SSSGSAVAVA
LGEVAFSLGT DTAGSGRVPA GCNQLVGLKP SKGYISTNGL IPACRTLDCI SIFAHTVDDA
QNVLAVAGVY DPEDPYARQA QPAVTSFSST NLKLATFSNL SWFGDTQQQA AWNAYVAQLA
ARGITLTEID PTPFFALAPL LYNGPWVAER LAALSEFVAE QPEAIHPVVR EIVLSGKKFS
AVDTFNAEYQ RADLARKIQQ ALSEFDALMV PTAPIFPTIE ALLAEPIKLN SELGTYTNFV
NLADLSALAV PACLRDDGLP FGITLIAEAW ADARLAAIAK QLNQEQATIP PLRHDEIELA
VVGAHLTGMP LNHQLTNRGG RLLEQTTTAA SYRLYALANT TPPKPGLVFD TEGDEIIVEV
WALPRTALAD FIQEIPPPLG LGSLTLVDGR QVTGFICEPR ALQDAKDVTA FGGWRPYIAS
RQSAPLAPQP KGITHA
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