Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1104 |
Symbol | |
ID | 8534252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1194089 |
End bp | 1194889 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646383489 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003262987 |
Protein GI | 261855704 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCGC CCTTGCGTTT TCCGGTAAAG CAGCCGCGCA GCGCCAAAAC GCCTGCTTTA GCCGAGCGCG TGTACGCCCA AGTCAAAAAA GCGCTGTTTA ACTTCGAATT GCTGCCCGGC GAGCGTTTCA GTGAAAAAAC GGTGGCCGAA CTGACCGGCG CCAGCCGCAC ACCCGTACGT GAAGCACTCA CTCGGCTGGC AAGAGAAGGC TTTCTAAGCG TTCAGAATCG ATCCGGCTGG CGGGTCAACG AATTGGATTT TGCCGTGTTC GACCAACTGT ATGAAGTTCG CACCATCGTC GAACTCGCCA GTATTGACCG CTTGACCGCA CAAACAGAAC CGTCGGGCGT CAACGAACTC GCTGCAATCT GGCAGGTACC AGAAGCGGAA CGCCTGGCGG ATGGCCCTGC CGTATTCACG CTCGACGAGC AGTTCCATAA CCAGCTGGTT GCCGCGACAG GCAATGCCGA ACTGCATCGA ATCCACACCG GCGTTACCGA GCGTATCCGC ATTGTGCGTC AACTGGATTT TACCGAGAGC CATCGCATCG AAGCGACCTA CAACGAACAC GCCGCCATTC TTGCGGCCAT CGCTCAACAC CGTGGCAACG AGGCCAAACG GCTGCTTCAA ACCCACATCG AACTGTCAAG ACAGTCCGTT CGGAAAATCA GCCTTCATCG CCTGTATGAA GCGCGCGAAC GGATGCGTGA ACGCGCTGCA TCACTCAACC CCGTTTCAGA AACCGAGACC GGCGGAATCC GGCCAAACCC ACTTGTGACC CCGCAAGAAA ATCTCGTTTG A
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Protein sequence | MTPPLRFPVK QPRSAKTPAL AERVYAQVKK ALFNFELLPG ERFSEKTVAE LTGASRTPVR EALTRLAREG FLSVQNRSGW RVNELDFAVF DQLYEVRTIV ELASIDRLTA QTEPSGVNEL AAIWQVPEAE RLADGPAVFT LDEQFHNQLV AATGNAELHR IHTGVTERIR IVRQLDFTES HRIEATYNEH AAILAAIAQH RGNEAKRLLQ THIELSRQSV RKISLHRLYE ARERMRERAA SLNPVSETET GGIRPNPLVT PQENLV
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