| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1102 |
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| Symbol | |
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| ID | 8534250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1190995 |
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| End bp | 1192680 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383487 |
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| Product | urea ABC transporter, permease protein UrtB |
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| Protein accession | YP_003262985 |
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| Protein GI | 261855702 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCATC TTACCCGCAG TCACCCGCGA TCCAGCGCCG CGCCAATCGG ATTTAAACGA
TTCCGGCACT GGATCGCCCC AATTTTCACG TTGTGCCTTC TGATGGGCGC AACGCTCCCT
ATGCCGATGG CGCAGGCCGA CTCAGCTTCG CCTTCATTGG CAACAGGCAG CCCCACCGTT
TCCGCCATCG CAAGTGATGA CGCCATGACG CGCAGCCACG CCATCAAGGC TTTGATACTT
CAGCCGCCGG CCGGTGCCGC CGATGTTCTG CATGCGCTTG ATCAAGGCAT GCTCTATGTC
AAAGCCAAGC CCGTCGCGCA ACTCGGTATT GCCGATGCCG CAGGAAAAAT TTCCGCCATT
GACTCGGAAG AGATCCTCGG CAACACCAGT GATGCCCAAT GGCAACCTGT ATCGATCAAT
AACGTGATTC GCATCCAGTT GCGGCCGCGT CTTGATCTGA TGGCGCTGGC ATCACCCGAT
GTATCCAAAC GCCGTGACGC CGCTCAGGAT TTGTTTTCTG CACGGCTGAC TCCGGACTAT
ATCCATGAAA TAAAAGCATT GGAACCGCAA ATCAAAGATG CGGATGTGCA GGCGAATCTG
CGCAAATTGG TGGCTGGTTT CGAACTGAAT GATGCCGACC CCAAGGTTCG GCTCGTCGCC
ATTGCCGATG TTGCCGACGC ACTGGATCCG GAAATCCGCG CCAAACTGGC GAATCTGGCG
AGTAACGATA ATGACCCGGC TGTGAAAGCG GCGGCGGCCA AAACGCTCGA TGCCATCAAT
ACCCGTGTGG CCGGATGGCA GTTTTTGCAA AATCTGGTGT TCGGGCTCAG CCTCGGCTCG
GTATTGCTGC TGGCCGCGAT TGGCCTGGCG ATTACCTTCG GTGTGATGGG GGTCATCAAT
ATGGCCCATG GCGAGATGAT GATGATCGGT GCGTACACGA CCTGGCTGCT GCAACAACTG
ATGCCCAATC ACCTCACCGC GGCGCTGTTT CTGGCCATTC CGAGTGCCTT TCTGGCCGCG
GGCATTATCG GCATGGCGAT TGAACGCGGG TTGATCCGTT TCCTTTATGG TCGTCCGCTG
GAAACCCTGC TGGCAACATT CGGTTTGAGC CTGATGCTGC AACAGGCCGC ACGAATTATT
TTCACCCCGC TCAATCGTGC CGTTGCCCTG CCGGATTTCA TGAGTAATAG CTGGGTTGTC
AATCCGGTAT TCGCCATCAC ATATAACCGG CTGTATATCC TGATTTTTTC ACTGACCGTC
TTCTTTGCCC TTTTACTTTT GCTCAAGCGA AGCACCTTCG GGTTACGAAT CCGTGCTGTC
GCACAAAACC GTGCCATGGC CCGAGCCTGC GGGGTGCGTT CAAACTGGAT CGATGCCCTC
ACCTTCGGTC TTGGTTCCGG CATCGCCGGT ATCGCCGGTG TGGCGCTGGC GCAGATTACG
AATGTCGGCC CCAATCTCGG CCAGAGTTAT ATCGTCGATT CATTCATGGT CGTAGTACTG
GGCGGCGTCG GTAATTTGTG GGGCACGCTG GTCGCCGGGA TGGGTATCGG CGTGCTGAAT
AAATTTCTCG AACCCTATTC CGGCGCTGTT CTGGCGAAAG TCGTGGTGCT GGTGCTCGTG
ATCCTCGTTA TTCAAAAACG CCCGCGTGGA TTATTCCCGC AAAAGGGCCG CGCGGCGGAG
GAATAG
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| Protein sequence | MTHLTRSHPR SSAAPIGFKR FRHWIAPIFT LCLLMGATLP MPMAQADSAS PSLATGSPTV
SAIASDDAMT RSHAIKALIL QPPAGAADVL HALDQGMLYV KAKPVAQLGI ADAAGKISAI
DSEEILGNTS DAQWQPVSIN NVIRIQLRPR LDLMALASPD VSKRRDAAQD LFSARLTPDY
IHEIKALEPQ IKDADVQANL RKLVAGFELN DADPKVRLVA IADVADALDP EIRAKLANLA
SNDNDPAVKA AAAKTLDAIN TRVAGWQFLQ NLVFGLSLGS VLLLAAIGLA ITFGVMGVIN
MAHGEMMMIG AYTTWLLQQL MPNHLTAALF LAIPSAFLAA GIIGMAIERG LIRFLYGRPL
ETLLATFGLS LMLQQAARII FTPLNRAVAL PDFMSNSWVV NPVFAITYNR LYILIFSLTV
FFALLLLLKR STFGLRIRAV AQNRAMARAC GVRSNWIDAL TFGLGSGIAG IAGVALAQIT
NVGPNLGQSY IVDSFMVVVL GGVGNLWGTL VAGMGIGVLN KFLEPYSGAV LAKVVVLVLV
ILVIQKRPRG LFPQKGRAAE E
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