| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1099 |
|---|
| Symbol | |
|---|
| ID | 8534247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1188327 |
|---|
| End bp | 1189022 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646383484 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtE |
|---|
| Protein accession | YP_003262982 |
|---|
| Protein GI | 261855699 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | [TIGR03410] urea ABC transporter, ATP-binding protein UrtE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.810395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACAC TGAATGCCAT TAATCAATAC TATGGCGGCA GCCATATCCT GAACAATATC
AACCTCTCGA TCGATGCCGG GGCGCTGGTA TGCCTGCTGG GTCGCAATGG TGTCGGCAAA
ACCACGCTCA TGCGTTCAAT TATGGGCATG GTTGCGCTAA AAAGCGGCGA TATTAACTTT
GCTGGACAAG ATCTTTCCAA GGCATCGACA GAGCAACGCG CACGGGCCGG TATTGGCTTT
GTGCCACAGG GCCGAGAAAT TTTCCCGCTG CTCACCGTAG AAGAAAACCT CAAACTTGCC
CTGGCCGGAC GACGCGACAA GGTGCGTAAA ATCCCGGCAC AAATATATGA CCTGTTCCCG
GTATTGCAGG AAATGCGCTA TCGGCGTGGG GGCGATCTCT CCGGTGGCCA GCAGCAACAG
TTAGCCATTG GCCGAGCACT GGTGCTCGAC CCGAAAATCC TGCTGCTGGA TGAACCTACC
GAAGGCATCC AGCCTAATAT CGTGGTTGAA ATCGGTGAGG TGTTGCGCCG CTTGAATCAG
GAGCTGGGTC TGGCTGTTTT ACTCGTGGAG CAGAAACTAC CCTTTGCCCG TCAGGTTGCC
GACCACTTCG TGATTATGGA GCGCGGAGAA ATTCAAGCCA CTGGGGCGAT GGGCACACTC
GACGATGCGC TTATCGGCCA GTATCTGACG GTTTGA
|
|---|
| Protein sequence | MLTLNAINQY YGGSHILNNI NLSIDAGALV CLLGRNGVGK TTLMRSIMGM VALKSGDINF
AGQDLSKAST EQRARAGIGF VPQGREIFPL LTVEENLKLA LAGRRDKVRK IPAQIYDLFP
VLQEMRYRRG GDLSGGQQQQ LAIGRALVLD PKILLLDEPT EGIQPNIVVE IGEVLRRLNQ
ELGLAVLLVE QKLPFARQVA DHFVIMERGE IQATGAMGTL DDALIGQYLT V
|
|---|
| |