| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1090 |
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| Symbol | |
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| ID | 8534237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1177784 |
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| End bp | 1179124 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383474 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003262973 |
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| Protein GI | 261855690 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAC ACGTTTTTCG TGCCTTGGCA ATGGGTATGG TGGCAATGGG CGTGGTCATG
GGGGCTGCTT TCCCCTTGTT CGTTTTGGGT TTCGGTGTTC CTAAATCAAC CGCTTTTTCA
CCTACTTTTA TCATTGCCAC GCTTGTTGCC GGGCTCGTCG TCGGTGGACT GAATTTTGCC
TTGGCCAGCC GCATCGTCCG ACCACGTTTG CGTCAGTTGA GCTCAAGAAT GCAGCAAGTG
CGCGCGGCCA TGCAAAAGGC GACTTTCTCA GGCGACTGGA CGGCCTGTAA CCCCGCAGTT
TGTCGTTTGC ATGAGCAGGA CGAGGATGAA CTCGGCGCCG TGGCCCAAAG CTACAATGCG
TTGCTCCATG CGCTGCACGA TGCCCATATG GTTGAAGCCC GCATTCGTGA TTTCACCCAG
ACGGTATCCA GTAAACTTGA TTTGCATGAA CTGGGCGATC AAGCCCTGGG GTTGCTGCAA
GCCAATGCAC ATGCTCAGGG CGGGGCGATT GTGCTCGAGC GTCAGGGCGA GTGGACTGTG
TTGGCTTCCC GAGGGCTCTC CCATCCTGAA AAACTCGTAG AGAATAAAGT CTATTTCAAC
GCGAAGGATG AGGCGGTGCA AACGAGAATC ACCCTGCCAC CGGGCGTGAC TGTTGATGCC
ATCCTATCCC ATTTCGTACC CAGCGATGTC TTGCTGACAC CCATTAAAAA TCATGGATTT
GTATTGGGTT GGGTCATTCT GGCCTCGGCC ACTCCGTTTG CCGATGATGT ACCACGATTA
ATGCCGCTGT TGATGCAAGG TCTGGGATTG GCACTCAATA ATGCACTTCT GCATGATGAT
TTGCAGCGTG TTGCCGCCTT GGATCCGCTG ACCGGCGTTT ATAACCGTCG ATTCGGTTTT
AAACGATTGG AAGAGGAATT GACCCGTGCC TCACGGGACC ACTCTTCTTT GTCCGTTTTA
CTGCTTGATC TGGACCATTT CAAGCGGGTA AACGATACAT ATGGTCATTT GAGTGGCGAT
AAAGTGCTTA TTCGTACGGC GCACGTCTGT CGGGAAATCC TGCGTGAAGG CGATGTTCTG
ATGCGGTATG GGGGCGAGGA GTTTGTTGTT GTCCTGCCTG GTGCCAGCAT TCAGGATGCA
CGTGATGTTG CCGAACGTAT TCGCTTTGCA ATAAGCCAGT CACAGATCAA TCTGGGCGAT
CAATTGCTAC AGGTCACGTC GAGTATTGGT GTTGCCGCCA CGTCAGGCCA AAAAGCCATT
GCTGCCGAAG AGCTGATTGC ACTGGCCGAC GAGCGCCTGT ACAAGGCAAA AGCAACCGGC
CGTAATAAGG TCGTATCCTA A
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| Protein sequence | MSKHVFRALA MGMVAMGVVM GAAFPLFVLG FGVPKSTAFS PTFIIATLVA GLVVGGLNFA
LASRIVRPRL RQLSSRMQQV RAAMQKATFS GDWTACNPAV CRLHEQDEDE LGAVAQSYNA
LLHALHDAHM VEARIRDFTQ TVSSKLDLHE LGDQALGLLQ ANAHAQGGAI VLERQGEWTV
LASRGLSHPE KLVENKVYFN AKDEAVQTRI TLPPGVTVDA ILSHFVPSDV LLTPIKNHGF
VLGWVILASA TPFADDVPRL MPLLMQGLGL ALNNALLHDD LQRVAALDPL TGVYNRRFGF
KRLEEELTRA SRDHSSLSVL LLDLDHFKRV NDTYGHLSGD KVLIRTAHVC REILREGDVL
MRYGGEEFVV VLPGASIQDA RDVAERIRFA ISQSQINLGD QLLQVTSSIG VAATSGQKAI
AAEELIALAD ERLYKAKATG RNKVVS
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