| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1088 |
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| Symbol | |
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| ID | 8534235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1174386 |
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| End bp | 1176647 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383472 |
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| Product | Lysine decarboxylase |
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| Protein accession | YP_003262971 |
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| Protein GI | 261855688 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTTC GTTTCCCCAT CGTCATCATT GATGAAGATT TTCGTTCTGA AAACGCCTCC
GGTCTTGGAG TGCGTGCGTT GGCCGACGCC ATCCGTGCGG AAGGGGAAGA AGTACTCGGC
GTGACGAGTT ACATTGATCT GGCCTCGTTT GCACAACAGC AGAGTCGGGT TTCCGCCTTC
ATCGTTTCCA TCGATGATGA GGAATTCAGC ACGCTGAATC ATGAACCGGA TCAGGAACTG
CCTGTCATCG CGCAGTTGCG CAAGTTCATC CATGAGATTC GCTTCCGTAA TTCAGACATT
CCTATTTTCC TCTATGGCGA AACCCGGACC AGTCGCCATT TGCCCAACGA GGTGCTTAAG
GAACTGCATG GCTTTATTCA CATGTTCGAG GACACGCCCG AGTTTGTGGC GCGTCATGTG
ATTCGTGAAG CCCGGTCTTA TCTGAATTCG CTGTCGCCTC CGTTCTTCCG TGCATTGACC
GGTTATGCGG CCGATGGCTC CTATTCATGG CATTGCCCTG GGCATTCAGG CGGCGTCGCG
TTCCTGAAAA GCCCGGTGGG TCAGATGTTC CACCAGTTCT TCGGTGAAAA TCTGCTGCGC
GCCGATGTAT GCAACGCAGT CGATGAACTC GGGCAACTGC TTGATCACAC GGGGCCGGTG
GCCGCATCCG AACGCAATGC CGCACGTATT TTCAATGCCG ATCACCTGTT CTTTGTCACC
AACGGCACAT CGACCAGCAA CCGGATGGTC TGGAATTCCA ATGTGGCGCC GGGCGATATC
GTGGTGGTTG ATCGAAACTG CCACAAATCG ATTCTGCATT CGATCATCCT GACCGGCGCC
ATTCCGGTAT TCATGATGCC TACGCGAAAT CATTACGGCA TCATCGGCCC GATTCCGCAG
AGGGAATTTT CGGTCGAGAA CATCAAGGCG AAGATCGAGG CGCATCCTTT TGCATCGAAG
GCTGAAGACA AGACACCTAA AATTCTCACC ATCACGCAAT CAACCTACGA CGGCATTATC
TACAACGTCG AAGAAATCAA GAACGAGCTG GATGGCTATG TCGAAAACCT GCATTTCGAC
GAAGCTTGGT TGCCCCATGC CGCCTTCCAC GATTTTTATG GTGACTACCA CGCGATTGGC
GCTGAGCGTC CTCGTTGCAA GAAGTCGGTT ATTTTCTCGA CTCAGTCCAC GCACAAAATG
TTGGCGGGGT TGTCGCAGGC GTCACAGATT CTGGTTCAGG ACAGCAAACA ACATTTGTTC
GACCGTGATG TGTTCAACGA GGCGTACTTG ATGCATTCGT CCACATCGCC GCAGTACGCG
ATCATTGCCT CCTGCGATGT GGCCGCGGCC ATGATGGAGC CGCCGGGTGG TACGGCGTTG
GTCGAGGAAT CGATTCTCGA AGCGCTCGAT TTCCGCCGTG CCATGCGCAA GGTGGATGCC
GAATACGGCG ACGATTGGTG GTTCAAGGTC TGGGGGCCGG ACGTTCTTGC GGAAGAGGGC
GTCGGTTCGC AGGACGATTG GATGATTTGT GCTGAAGACG AGTGGCACGG TTTCGAGCGG
ATGACCGATC GTTTCAACAT GCTCGATCCG ATCAAGGCGA CGCTGATCAC CCCCGGCTTG
AATTTGAATG GTGATTTCGA TGAAACGGGC ATTCCGGCTT CGGTGGTCAC AAAATATCTT
GCCGAGCATG GTGTTGTCGT TGAAAAAACG GGCTTGTACA GCTTCTTCAT CATGTTCACG
ATCGGCATTA CAAAAGGGCG CTGGAACACC CTGCTGACGG CGCTGCAACA GTTCAAGGAC
GAATACACCA AGAACCAACC GCTGTGGCGG ATTCTGCCGG ATTTCGTCGC AAAATATCCG
CGTTATGAGC GTATTGGCCT GCGTGATCTG TGCCAGCAAT TGCACAATCT GTACAAGAAG
AACGATGTCG CACGCCTGAC GACCGAGATG TATCTATCGA ATATGGAACC GGCCATGCGG
CCTGCGGATG CCTGGGCAAA AATGGCGCGC AAGCAGATCG ATCGCGTACC GATCGACGAA
CTAGAAGGCC GCATTACTGC CTCGCTCGTA ACGCCGTACC CGCCGGGTAT TCCATTGTTG
ATTCCGGGTG AGCGTTTCAA CAAAACCATC GTTGATTACC TGAAATTCGC GCGTGAGTTC
AACAAGCAGT TGCCTGGGTT CGAGACCGAC GTTCACGGCC TGGTCGCAGA AGAAACCGAT
CACGTCAAAT CCTATTTTGT GGATTGCGTC AGGGACGATT GA
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| Protein sequence | MLFRFPIVII DEDFRSENAS GLGVRALADA IRAEGEEVLG VTSYIDLASF AQQQSRVSAF
IVSIDDEEFS TLNHEPDQEL PVIAQLRKFI HEIRFRNSDI PIFLYGETRT SRHLPNEVLK
ELHGFIHMFE DTPEFVARHV IREARSYLNS LSPPFFRALT GYAADGSYSW HCPGHSGGVA
FLKSPVGQMF HQFFGENLLR ADVCNAVDEL GQLLDHTGPV AASERNAARI FNADHLFFVT
NGTSTSNRMV WNSNVAPGDI VVVDRNCHKS ILHSIILTGA IPVFMMPTRN HYGIIGPIPQ
REFSVENIKA KIEAHPFASK AEDKTPKILT ITQSTYDGII YNVEEIKNEL DGYVENLHFD
EAWLPHAAFH DFYGDYHAIG AERPRCKKSV IFSTQSTHKM LAGLSQASQI LVQDSKQHLF
DRDVFNEAYL MHSSTSPQYA IIASCDVAAA MMEPPGGTAL VEESILEALD FRRAMRKVDA
EYGDDWWFKV WGPDVLAEEG VGSQDDWMIC AEDEWHGFER MTDRFNMLDP IKATLITPGL
NLNGDFDETG IPASVVTKYL AEHGVVVEKT GLYSFFIMFT IGITKGRWNT LLTALQQFKD
EYTKNQPLWR ILPDFVAKYP RYERIGLRDL CQQLHNLYKK NDVARLTTEM YLSNMEPAMR
PADAWAKMAR KQIDRVPIDE LEGRITASLV TPYPPGIPLL IPGERFNKTI VDYLKFAREF
NKQLPGFETD VHGLVAEETD HVKSYFVDCV RDD
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