Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1079 |
Symbol | |
ID | 8534226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1166997 |
End bp | 1167746 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646383463 |
Product | protein of unknown function DUF481 |
Protein accession | YP_003262962 |
Protein GI | 261855679 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGAA ACTCAGCGAC TATCTTCCCC TTGATTGCTG CCTGCTTGAG CGCGCCGCTT TTCCTGTGTT CAAACGCCCA GGCAGCTCAG ACGAGTGCCG TCGAAAGCCC GTGGTCCGGT GCGGCCGAAT TGGGTGCGTC GATTAGTACC GGCAATAGCC AAACAAGCAG TGTCAACGGC AAATTCTCGC TCAAATACGA GCAAGGCCCT TGGTCTCATC GATTTAAGGT ATCCACATTG CAAAGCAGCG AGGACGGGGC CTCTACCGCG AACCGCACCG TGGCCGATTT CTCCAGCCGC TTTGCATTTG ACCTGCGCAA TTACGCTTTT GATTCATTGC GATACAGTCA TGATGCCTTT TCGGGTTATA CCTATCAGGC ATCCGTTGCC GCCGGTTTAG GGCGCAAATT TTGGGTAAGC GACCTGGGTG AACTCAGTGC TGAAGCCGGG CCTGGTTATC GCAAGTCTAA AACGCAAGAT GGCACGAGCG AGAACAACCT GATTGGTCTG GCAAGAGCAA ACTTTAGGTA CAACATTTCA GACACTGCCA AGTTTGAACA ATCGCTGACT GTTTTAGGTG GTGCGGCGAA CACCGAACTG GAATCCGAAA CTGCGTTGAG CGTGAACATG ACGAAAACGC TGGCACTTAA GGTGGCCTAT ACCGTGCAGC ACAACACCAA GGTGCCGGTC GACACCAAAA AAACCGATAC CTTCACATCA ATCAATCTTG TTTACGCGTT TGGAAAGTAA
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Protein sequence | MQRNSATIFP LIAACLSAPL FLCSNAQAAQ TSAVESPWSG AAELGASIST GNSQTSSVNG KFSLKYEQGP WSHRFKVSTL QSSEDGASTA NRTVADFSSR FAFDLRNYAF DSLRYSHDAF SGYTYQASVA AGLGRKFWVS DLGELSAEAG PGYRKSKTQD GTSENNLIGL ARANFRYNIS DTAKFEQSLT VLGGAANTEL ESETALSVNM TKTLALKVAY TVQHNTKVPV DTKKTDTFTS INLVYAFGK
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