Gene Hneap_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1074 
Symbol 
ID8534221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1161602 
End bp1162309 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID646383458 
Productendonuclease III 
Protein accessionYP_003262957 
Protein GI261855674 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA ATACCCGCCG TCTGTTATTC GAGCGACTTT CCGCACAACG CCCAAACCCG 
ACGACTGAAC TGTTATTCGA CAACGGGTTC GAGCTACTGA TCGCCGTTAT GCTCTCCGCG
CAATCGACCG ATGTAGCGGT GAACAAAGTC ACTCGCCGAT TATATCCGGT TGCCAACACC
CCAGAAGCCC TATTGACGCT GGGTGAGGAG CGGCTTGAAT CTTACCTGAA AACATTGGGG
TTATATCGTG CCAAAACCCG CAATGTTCTG GCCACCTGCC AAATCCTGCT TGAGAAATAT
GCCAGTGCGG TGCCGCGAGA TCGCGCAGCG CTGGAGTCAC TCCCCGGCGT CGGTCGCAAG
ACGGCAAATG TCGTGCTCAA TACCCTGTTT CGTGAGCCGG TCATGGCGGT GGACACGCAT
ATCTTCCGTG TGGCCAATCG CACCGGGCTT GCGCCGGGAA AAACCGTGCT CGCGGTAGAA
AAGGCCTTAA TGAAACATGT GCCGAAAGAA TACCTGATCG ACGCCCATCA CTGGCTGATT
CTGCATGGTC GCTATACCTG CAAGGCACGC AAGCCCGATT GCGGCGCCTG CGTTGTCTGT
GATCTGTGCG ATTACCGCCA GAAAACGGAA GGCTGCAACC CGGAGTTCAC CGGCAAATAC
AACCCATCCG ATTCACTTTC CACGGAAACG GCCCATGTAC AGCAATGA
 
Protein sequence
MNKNTRRLLF ERLSAQRPNP TTELLFDNGF ELLIAVMLSA QSTDVAVNKV TRRLYPVANT 
PEALLTLGEE RLESYLKTLG LYRAKTRNVL ATCQILLEKY ASAVPRDRAA LESLPGVGRK
TANVVLNTLF REPVMAVDTH IFRVANRTGL APGKTVLAVE KALMKHVPKE YLIDAHHWLI
LHGRYTCKAR KPDCGACVVC DLCDYRQKTE GCNPEFTGKY NPSDSLSTET AHVQQ