Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1074 |
Symbol | |
ID | 8534221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1161602 |
End bp | 1162309 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646383458 |
Product | endonuclease III |
Protein accession | YP_003262957 |
Protein GI | 261855674 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA ATACCCGCCG TCTGTTATTC GAGCGACTTT CCGCACAACG CCCAAACCCG ACGACTGAAC TGTTATTCGA CAACGGGTTC GAGCTACTGA TCGCCGTTAT GCTCTCCGCG CAATCGACCG ATGTAGCGGT GAACAAAGTC ACTCGCCGAT TATATCCGGT TGCCAACACC CCAGAAGCCC TATTGACGCT GGGTGAGGAG CGGCTTGAAT CTTACCTGAA AACATTGGGG TTATATCGTG CCAAAACCCG CAATGTTCTG GCCACCTGCC AAATCCTGCT TGAGAAATAT GCCAGTGCGG TGCCGCGAGA TCGCGCAGCG CTGGAGTCAC TCCCCGGCGT CGGTCGCAAG ACGGCAAATG TCGTGCTCAA TACCCTGTTT CGTGAGCCGG TCATGGCGGT GGACACGCAT ATCTTCCGTG TGGCCAATCG CACCGGGCTT GCGCCGGGAA AAACCGTGCT CGCGGTAGAA AAGGCCTTAA TGAAACATGT GCCGAAAGAA TACCTGATCG ACGCCCATCA CTGGCTGATT CTGCATGGTC GCTATACCTG CAAGGCACGC AAGCCCGATT GCGGCGCCTG CGTTGTCTGT GATCTGTGCG ATTACCGCCA GAAAACGGAA GGCTGCAACC CGGAGTTCAC CGGCAAATAC AACCCATCCG ATTCACTTTC CACGGAAACG GCCCATGTAC AGCAATGA
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Protein sequence | MNKNTRRLLF ERLSAQRPNP TTELLFDNGF ELLIAVMLSA QSTDVAVNKV TRRLYPVANT PEALLTLGEE RLESYLKTLG LYRAKTRNVL ATCQILLEKY ASAVPRDRAA LESLPGVGRK TANVVLNTLF REPVMAVDTH IFRVANRTGL APGKTVLAVE KALMKHVPKE YLIDAHHWLI LHGRYTCKAR KPDCGACVVC DLCDYRQKTE GCNPEFTGKY NPSDSLSTET AHVQQ
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