| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1066 |
|---|
| Symbol | |
|---|
| ID | 8534213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1154084 |
|---|
| End bp | 1154797 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646383450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003262949 |
|---|
| Protein GI | 261855666 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGAG CCTACCAGAA CCGCAAAGAA TCCATGGCCA AAACGGCCGA TGCCAAAGCC
AAGGTATACA GCAAGTATGG CCGCGAGATT TACGTCGTCG CCAAATCCGG TGGCACTGAT
CCAAACGGCA ATCTGGCACT GCGCAGCATG ATCGAACGTG CAAAAAAGGA TCAGGTGCCT
GCCCACGTCA TCGAAAAGGC CATTGAAAAA GCCAAGGGCG GTTTCGGTGA GGATTACAGC
CCCGCACGCT ATGAGGGTTT TGGCCCCGGT GGCGTGGTGG TTCTGGTCGA TTGCTTGACC
GACAACCCCA ATCGCACCAT CGGCGACGTG CGCAACTGCT TCACCAAAAC CAAAACCAAA
CTCGGCACGC CCGGCACGGT GATGCACCAG TTTGATCATG CCGCCATTTT TTCATTTAGC
GGCGAAGAAG ATGCTGTGCT CGAAGCCCTG CTGATGGACG ATGTCGATGT CACCGATATC
GAAAGTGAAG ACGGCAAAGT GACTGTGTTC GTGCCCAACA CGGAATACAA CAAGGCTCGT
CAGGCGCTGA TCACAGCTTT TGGCGAGATC GACTTCGATG TGGACGAAAT CCAGTTCGTA
CCCAAGACAT CAACGCCGAT TAGCGGTGAC GATGTAGCCA CCATGGATAA ATTGCTGGAT
ATGCTCAACG ATGTGGAAGA TGTGCAGAGC GTTTATCACG ACGCGGTGTA TTGA
|
|---|
| Protein sequence | MGRAYQNRKE SMAKTADAKA KVYSKYGREI YVVAKSGGTD PNGNLALRSM IERAKKDQVP
AHVIEKAIEK AKGGFGEDYS PARYEGFGPG GVVVLVDCLT DNPNRTIGDV RNCFTKTKTK
LGTPGTVMHQ FDHAAIFSFS GEEDAVLEAL LMDDVDVTDI ESEDGKVTVF VPNTEYNKAR
QALITAFGEI DFDVDEIQFV PKTSTPISGD DVATMDKLLD MLNDVEDVQS VYHDAVY
|
|---|
| |