| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1053 |
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| Symbol | |
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| ID | 8534200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1137060 |
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| End bp | 1139117 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646383437 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_003262936 |
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| Protein GI | 261855653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.531844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTC AAGCCCCTCG TCGCATCTTG GTGACATCTG CTCTGCCCTA TGCCAATGGC
CCACTTCACT TGGGGCATAT CATCGAAACC ATCCAGACGG ATATTTGGGT GCGCGCACAA
AAACTGTTTG GCAATGAATG CCGCTATCTG TGTGCGGACG ATACGCATGG CACGCCCATT
ATGCTCAAGG CGCAGCAAGA GGGAATCACG CCGGAAGAGC TCATTACGCG CATAGGCAAT
AGTCACAAAG CCGATTTTGC TGATTTCATG ATTGGCTTCG ACATATTTCA CAGTACGCAT
TCCGAAGAAA ACCGGCGTAT GGCCAGTGAA ATTTTCAAGC GGCTTGACGC ACGTGGCTTG
ATCAGTCGCA AAACCATCAA GCAAGCCTAT GATCCGGAAA AGGAAATGTT CCTGCCCGAT
CGCTTCATCA AGGGTGAGTG CCCCAAGTGC GGCGCCTTGG ACCAATACGG TGACAACTGC
GAGAAATGTG GCGCTACCTA CAGCCCGACC GAACTAAAGA ATCCGCGCTC AGTGCTTTCC
GGTGCAACAC CCGTCGAACG CGATTCCGAA CACTATTTCT TCGACCTTCC AAAAATGCAA
GATCGGCTCA AACAATGGTT GAGCGAAGAC CGTGTACAGC CCGCCATTCG CGCAAAACTG
CAGGAATGGT TTGATAGCGG CCTGCAGGCC TGGGATATTT CACGGGATGC GCCCTATTTC
GGCTTTGAGA TACCCGGCGC ACCCGGCAAA TTCTTTTATG TCTGGCTGGA TGCGCCCATC
GGCTATATCG GCGCCTTTCT GAAACTGGCC GAATCGACAG GGCTTGATTT CGACGAATAT
TGGGGCGAAA ACGCCCAAAC CGAACTCATC CATTTTATCG GCAAGGATAT CGCGTACTTC
CACACGCTGT TCTGGCCAGC CACGCTCATG GGCGCTGGGT TGCGCACACC GACAGCCGTG
TATGCTCATG GCTTTTTGAC CCTCAACGGC GAAAAAATGA GCAAGTCGCG CGGCACATTC
ATCCAGGCCC GCACCTATCT CAACCACCTC GACCCGCAGG CCCTGCGCTA CTATTTTGCG
GCCAAGCTCA GCAGCGGTAT CGACGACATC GATCTCTCGC TCGAAGATTT CCGGCTGCGC
GTCAACTCGG ATCTGGTAGG CAAGGTCGTC AATATTGCCA GCCGTTGCGC CGGTTTTATT
CACAAGCAGT TCAATAGTGA GTTGAGTGCC GAACTTGCCC ACAGCGAACT CCACGAACAA
CTCGTGGCCG CCGCCGAATC CATCAAGACA CGCTATGAGC GCCGTGAAAC CGGTCAAGCC
ATGCGCGAAA TCATGGCGCT GGCTGACTTG GTGAATCAAT ACATCGATGA GAAAAAACCC
TGGGCCATGG CCAAGTCGCC CGACTCGCTT GCCGCCGTTC AAGGTGTGTG TACCGATGGC
CTGAATGCCT TTCGCATCTT GATGACCTAC CTCACGCCCG TTCTGCCGGC CATGAGTGCC
AAGGCGGCAC AATTCCTGAA CCTGGCTGAA TTCCGTTGGT CGGATCTTGC ACGTCCGATG
GTTGGACACA AGATCAACGC CTTTGAACCG CTGATGACAC GTATCGAACA GACAGCCATC
GATGCGCTGA TCAAAGCGAC GCAAGAAGAA GCTCAAGCAA TGAACCAAGC GAACACCACG
CCGCTCACAG AAGTGAAAGC ACCGCGTGCC GAAATTGAAC CGATTGCGGA AGAAATCACC
ATCGACCAAT TCACGGCCGT GGATTTGCGC GTGGCGCGAA TCGTCAATGC CGAGCACGTC
GAAGGTGCAG CGAAATTGTT ACGATTGACG CTGGATATCG ATGAGGAGAA AACCCGCCAG
GTGTTCGCCG GAATCAAATC CGCTTATGAT CCTGCCACCC TCGTTGGCCG CCATACCGTC
ATGGTCGCCA ACCTGAAACC CCGCCAGATG AAATTCGGCC TGTCGGAAGG CATGGTACTG
GCCGCGGGCG ATGGCAAAGG CGGGCTATTC ATTTTGTCAC CCGACGAAGG CGCGACCGCA
GGCATGCGTG TGAAATAG
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| Protein sequence | MTLQAPRRIL VTSALPYANG PLHLGHIIET IQTDIWVRAQ KLFGNECRYL CADDTHGTPI
MLKAQQEGIT PEELITRIGN SHKADFADFM IGFDIFHSTH SEENRRMASE IFKRLDARGL
ISRKTIKQAY DPEKEMFLPD RFIKGECPKC GALDQYGDNC EKCGATYSPT ELKNPRSVLS
GATPVERDSE HYFFDLPKMQ DRLKQWLSED RVQPAIRAKL QEWFDSGLQA WDISRDAPYF
GFEIPGAPGK FFYVWLDAPI GYIGAFLKLA ESTGLDFDEY WGENAQTELI HFIGKDIAYF
HTLFWPATLM GAGLRTPTAV YAHGFLTLNG EKMSKSRGTF IQARTYLNHL DPQALRYYFA
AKLSSGIDDI DLSLEDFRLR VNSDLVGKVV NIASRCAGFI HKQFNSELSA ELAHSELHEQ
LVAAAESIKT RYERRETGQA MREIMALADL VNQYIDEKKP WAMAKSPDSL AAVQGVCTDG
LNAFRILMTY LTPVLPAMSA KAAQFLNLAE FRWSDLARPM VGHKINAFEP LMTRIEQTAI
DALIKATQEE AQAMNQANTT PLTEVKAPRA EIEPIAEEIT IDQFTAVDLR VARIVNAEHV
EGAAKLLRLT LDIDEEKTRQ VFAGIKSAYD PATLVGRHTV MVANLKPRQM KFGLSEGMVL
AAGDGKGGLF ILSPDEGATA GMRVK
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