Gene Hneap_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1044 
Symbol 
ID8534191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1129276 
End bp1130370 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content58% 
IMG OID646383428 
Productpeptide chain release factor 1 
Protein accessionYP_003262927 
Protein GI261855644 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCCAT CTGCTCTGTT GAATCGGTTA TTCGCCCTGT CCGAACGGTA TGACGAACTC 
AATGCGTTGT TGTCCGATCC GGAGGTAATC AACAATCAGG ATCGATTCCG CAGCCTGTCG
AAAGAGCACG CGCGTCTGCA TGATCTCGTT GTGGTGCTCG ATCGCTATCA AAAGGCGAAA
GCCGACTTGC AGGCGGCCGA ACACATGAGC AAAGAGCCTG ATCGCGAGAT GGCCGCACTG
GCCCTCGAAG AAATGAAGGA ATTGCAGACT GAAATCGAAT CGCTGGATGA GGCGCTCAAA
GTTCATCTAT TGCCGCATGA TCCGGCCGAT GACGGTGATG TCATCCTTGA AATTCGAGCC
GGCACCGGAG GGGATGAAGC TGCCATCTTC GCGGGTGATT TGTTGCGGAT GTATTTGAAA
TACGCCGATA CCCAAGGATG GCGTACCGAA ATTCTTTCCG AACAACCGGG AGAGCATGGT
GGATACCGCG AAGTCATCGC CCAGATCAGC GGCGATGGTG TGTACGCAGC GCTTAAGTTC
GAATCCGGCG CGCACCGCGT ACAGCGTGTG CCGACCACGG AAACCCAAGG CCGCGTCCAT
ACCTCCGCTG CCACGGTCGC CGTGATGCCG GTCGTGCCGG AATCGGAGGC CATCACGCTC
GATCCTTCTA CCTTGAGAAT CGATACGTTT CGCGCGTCGG GTGCCGGTGG GCAGCACATC
AACAAAACCG ACTCGGCGAT TCGCGTGACC CACCTGCCGA CCGGGATGGT GGTGGAATGT
CAGGACGAGC GATCACAGCA CAAAAACAAA GCCCGCGCTT TGAGTGTGCT GGCCGCACGA
CTGGCTGATG CCGAGCGGCA GAAAGCTCAT GCGGAACAAG CGGCCACGCG CAAGGCACTC
GTGGGATCGG GCGACCGTTC CGAACGTATT CGCACGTATA ACTTCCCGCA GGGTCGTGTA
ACCGATCACC GCATCAATCT GACGTTATAC CAGCTCGATC GTGTGCTGTT GGGTGATCTT
GATCCGATCA TTCACCCGTT ACGACAGACC GATCAGGCCG ACCAACTGGC GGCGCTGGCT
CAGGCGCCGC TCTGA
 
Protein sequence
MLPSALLNRL FALSERYDEL NALLSDPEVI NNQDRFRSLS KEHARLHDLV VVLDRYQKAK 
ADLQAAEHMS KEPDREMAAL ALEEMKELQT EIESLDEALK VHLLPHDPAD DGDVILEIRA
GTGGDEAAIF AGDLLRMYLK YADTQGWRTE ILSEQPGEHG GYREVIAQIS GDGVYAALKF
ESGAHRVQRV PTTETQGRVH TSAATVAVMP VVPESEAITL DPSTLRIDTF RASGAGGQHI
NKTDSAIRVT HLPTGMVVEC QDERSQHKNK ARALSVLAAR LADAERQKAH AEQAATRKAL
VGSGDRSERI RTYNFPQGRV TDHRINLTLY QLDRVLLGDL DPIIHPLRQT DQADQLAALA
QAPL