Gene Hneap_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1015 
Symbol 
ID8534162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1096634 
End bp1097515 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content55% 
IMG OID646383399 
Productperiplasmic solute binding protein 
Protein accessionYP_003262898 
Protein GI261855615 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATTT TCTTTGCACC GTTTCAGATT GCGTTGTTAC TGGCTCTCAA TCTGGCTGCG 
TCCTCGGTCT GGGCAGCGTC ACCCATTGAT GTGGCCGTCA GCATTCCACC ACAAAAATAT
TTCGTACAAA TGATTGGTGG CGACCACGTC ACCGTCGAGG TTCTGGTCCC CGCCAATGCG
GAGCCGGAAA CCTACGAACC CACGCCGCGC CAGATTGCGC GTCTTTCCAA GGCCGATCTG
TACATGGAAA TCGGTGTGCC ACTCGAACGG GCCTGGTTGA AGCGTTTTAC CGCAGCCAAC
CCGAAAATGG TTGTGGTAAA TACCGCCCGC GGCATCGAGC GGATGCCGAT GCTTCGGCAC
GACCACGATC ATGGTGCTGC CAAAGGGCCG GGACTTGATC CGCATATCTG GTTATCGCCG
GTATTGGTGC GCATTCAGGC CATGAATATT CGCGATGCGC TGATCAAGGC CGATCCCGCC
CACGCCGCCG ATTATCTGCA AGGCTATGCC AAGCTCGCTC AGAAAATCGA TCAAGTCGAT
GGCGACATTC TCCAGTCTCT GGTCGATCAC CCGCTCAAAC AAACCCGATT CATCGTGTTT
CATCCGGCAT TCGGTTATTT CGCCGCAGCA TACGGCTTGA CACAGGTGCC CATCGAAATC
GAAGGTAAGG AACCCGGCCC GAGACAACTG GGCGAGTTGA TCACCTTTGC GAAGAACAAC
AATATCAAGG TCGTTTTCAT CGAACCCCAA TTTGCACAGA AAGCCGCCAA AACCATTGCC
GACTCCATCA ATGGAGAAGT GGTCACCATC GACCCGTTGC AAGAAGACTG GCCTGCCGGT
ATGGAAGCGA TTGCCACGGC ATTAAACAAG GCGCTGCGTT AA
 
Protein sequence
MRIFFAPFQI ALLLALNLAA SSVWAASPID VAVSIPPQKY FVQMIGGDHV TVEVLVPANA 
EPETYEPTPR QIARLSKADL YMEIGVPLER AWLKRFTAAN PKMVVVNTAR GIERMPMLRH
DHDHGAAKGP GLDPHIWLSP VLVRIQAMNI RDALIKADPA HAADYLQGYA KLAQKIDQVD
GDILQSLVDH PLKQTRFIVF HPAFGYFAAA YGLTQVPIEI EGKEPGPRQL GELITFAKNN
NIKVVFIEPQ FAQKAAKTIA DSINGEVVTI DPLQEDWPAG MEAIATALNK ALR