Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1015 |
Symbol | |
ID | 8534162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1096634 |
End bp | 1097515 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646383399 |
Product | periplasmic solute binding protein |
Protein accession | YP_003262898 |
Protein GI | 261855615 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATTT TCTTTGCACC GTTTCAGATT GCGTTGTTAC TGGCTCTCAA TCTGGCTGCG TCCTCGGTCT GGGCAGCGTC ACCCATTGAT GTGGCCGTCA GCATTCCACC ACAAAAATAT TTCGTACAAA TGATTGGTGG CGACCACGTC ACCGTCGAGG TTCTGGTCCC CGCCAATGCG GAGCCGGAAA CCTACGAACC CACGCCGCGC CAGATTGCGC GTCTTTCCAA GGCCGATCTG TACATGGAAA TCGGTGTGCC ACTCGAACGG GCCTGGTTGA AGCGTTTTAC CGCAGCCAAC CCGAAAATGG TTGTGGTAAA TACCGCCCGC GGCATCGAGC GGATGCCGAT GCTTCGGCAC GACCACGATC ATGGTGCTGC CAAAGGGCCG GGACTTGATC CGCATATCTG GTTATCGCCG GTATTGGTGC GCATTCAGGC CATGAATATT CGCGATGCGC TGATCAAGGC CGATCCCGCC CACGCCGCCG ATTATCTGCA AGGCTATGCC AAGCTCGCTC AGAAAATCGA TCAAGTCGAT GGCGACATTC TCCAGTCTCT GGTCGATCAC CCGCTCAAAC AAACCCGATT CATCGTGTTT CATCCGGCAT TCGGTTATTT CGCCGCAGCA TACGGCTTGA CACAGGTGCC CATCGAAATC GAAGGTAAGG AACCCGGCCC GAGACAACTG GGCGAGTTGA TCACCTTTGC GAAGAACAAC AATATCAAGG TCGTTTTCAT CGAACCCCAA TTTGCACAGA AAGCCGCCAA AACCATTGCC GACTCCATCA ATGGAGAAGT GGTCACCATC GACCCGTTGC AAGAAGACTG GCCTGCCGGT ATGGAAGCGA TTGCCACGGC ATTAAACAAG GCGCTGCGTT AA
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Protein sequence | MRIFFAPFQI ALLLALNLAA SSVWAASPID VAVSIPPQKY FVQMIGGDHV TVEVLVPANA EPETYEPTPR QIARLSKADL YMEIGVPLER AWLKRFTAAN PKMVVVNTAR GIERMPMLRH DHDHGAAKGP GLDPHIWLSP VLVRIQAMNI RDALIKADPA HAADYLQGYA KLAQKIDQVD GDILQSLVDH PLKQTRFIVF HPAFGYFAAA YGLTQVPIEI EGKEPGPRQL GELITFAKNN NIKVVFIEPQ FAQKAAKTIA DSINGEVVTI DPLQEDWPAG MEAIATALNK ALR
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