Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1013 |
Symbol | |
ID | 8534160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1094938 |
End bp | 1095777 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646383397 |
Product | ABC-3 protein |
Protein accession | YP_003262896 |
Protein GI | 261855613 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTCA CTGAGTTATT GCAGCAGAAC TTCATGCAGC ATGCCCTGCT GGCCAGCTTG CTGGTGAGCG TCACCTGTGG CGTGATTGGC GCGCTGATTG TGGTAAACCG GCTCACGTTC ATGGCCGGCG GCATCGCACA CACGGCGTAT GGCGGTGTCG GTTTGGCCTT CTTTCTCGGC GCACCCGTCC TGCCGACGGC CGGCGCCTTC ACCGCGGGCG CAGCCATGCT CCTCGGCACG TTGACATTAA AGAAGCGTGA ACGAACCGAT ACCCTCATCG GCGTGATCTG GGCAGCGGGC ATGGCGTTCG GCATCATCAT GATCAACCTC ACACCGGGCT ACAACGTGGG CCTGATGAGT TATCTGTTCG GCAGCATCCT CACGGTCCCG GCCAGTGATT TATGGCTCAT GCTCGGCATC GATGTCGTCA TCGTCAGCCT CACGCTCTAC TTTTACCGCG ATATTCTGTC GTTTTCCTTC GATCCGGATT TCGCCCGCTC GCGCGGCATT CCCGTGCAAT GGCTTTACTT TATGATTCTG ATCATGGTCG CCGAGGCGGT CGTGATGATG ATTCAGGTCG TCGGCTTGAT TCTGGTGATC GCCCTTTTGA CCCTGCCACC CTACCTTGCC GAGCGGCACA CCAAGAGTCT GGCCGGATTG ATGGTCGCTT CCGGCATCTG GAGTTTCGTG TTCTGTCTGG GCGGGCTCTG GGTCGCCTAC CAATTCGACC TCAGCTCCGG CGCCAGCATC ATCGCCACGG CCTGCACCTT CTACCTCGCT GTGGCCGGTG GTCAGACGCT GTGGAATCTG ATGCGCCGGC AGGAAAAAAC TGCGGCATAA
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Protein sequence | MTLTELLQQN FMQHALLASL LVSVTCGVIG ALIVVNRLTF MAGGIAHTAY GGVGLAFFLG APVLPTAGAF TAGAAMLLGT LTLKKRERTD TLIGVIWAAG MAFGIIMINL TPGYNVGLMS YLFGSILTVP ASDLWLMLGI DVVIVSLTLY FYRDILSFSF DPDFARSRGI PVQWLYFMIL IMVAEAVVMM IQVVGLILVI ALLTLPPYLA ERHTKSLAGL MVASGIWSFV FCLGGLWVAY QFDLSSGASI IATACTFYLA VAGGQTLWNL MRRQEKTAA
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