| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0980 |
|---|
| Symbol | |
|---|
| ID | 8534123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1054783 |
|---|
| End bp | 1055475 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646383360 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_003262863 |
|---|
| Protein GI | 261855580 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.475517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC CTAACGCGAC GAACGGTGCG GACGCAAGGA AGCATCTGCT GCCCGCACTG
GGATTGATTG TTTGTGCTGC TTTTGGCCTT GGTGGCTGCG CTTCGCTCCC GAATGGCCCG
AATGATGATA GTAATCAGTC GAGCAATGGC CTGGGTTGGC TTAATGCTTT GACCCAAAAC
GAAGATGAAA ATTACAGCTT CAAAAACAGC TCATTGAGCA CGAAACTTCC TTCGGTACCG
ATCAAGGCCA TCGATGACCC AAACGGAGTC AGAACCGCGG CGACAGAAGC CATCTTGCAG
GCGATCAGCC AGCTTGGCAC CGCTTATCAA TGGGGTGGCA CATCGAAGAA ACAAGGTTTT
GACTGCAGTG GGCTGACCAG CTTTGTCTAC AAGAAGGCTG ACATCGAACT GCCGCGCACT
GCCCGCGACC AATACGCATT CACTGAACGC ATTGCACGCT CGCAACTAAA GCCTGGTGAC
CTGCTGTTCT TCAAAATCCG CAGTCGCAAG ATCGATCACG TCGGTATTTA TATTGGCGAC
AATCGCTTCA TCCACGCGCC CAGAAAGGGC GAGCACGTTA CCTTCGCGCA GCTCAACAAT
GTTTATTGGC GTAAACACTT TGCGGGAGCC GGGCGCGTTC CGGGTGCTAG GCGGCTCAAT
ATGACCGAGC TTGATGCGCT AGCCGCCCAA TAA
|
|---|
| Protein sequence | MTTPNATNGA DARKHLLPAL GLIVCAAFGL GGCASLPNGP NDDSNQSSNG LGWLNALTQN
EDENYSFKNS SLSTKLPSVP IKAIDDPNGV RTAATEAILQ AISQLGTAYQ WGGTSKKQGF
DCSGLTSFVY KKADIELPRT ARDQYAFTER IARSQLKPGD LLFFKIRSRK IDHVGIYIGD
NRFIHAPRKG EHVTFAQLNN VYWRKHFAGA GRVPGARRLN MTELDALAAQ
|
|---|
| |