Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0969 |
Symbol | |
ID | 8534111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1043195 |
End bp | 1044241 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646383350 |
Product | integrase family protein |
Protein accession | YP_003262854 |
Protein GI | 261855571 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.23183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATACA TTCAGAAACG TGGTGATTAC CAATGGCGGG TTCAAATCCG CCGTAAGGGG CATCCGACCC AATGCAAAAC CTTCTTCACG CGCAAAGAGG CTGATGCGTG GGCTCGGCTC ATCGAGTCTG AAATGGATCG AGGTGTATTC TTCAGCAGGG TTGAGGCAGA GAGCACCTCG TTGGCGGAAG CGCTGGAACG TTACCGTAAA GAGGTCACAA GCAGGAAGAA GAGCGCGCAT CGTGAGGGAG TGCGGATTAA TTTCTGGCTG ACCCACCCTC TTTCAAGTCG GATGCTGGCC TCTTTTCGTG GTGCCGATTT TGCCAGATTC AGGGATGACC GCCGGAAAGA AGGCATTTCT GATTCCACGA TCAGACTTGA TCTTGCTCTC ATCTCCCATG TGTTCACCAT CGCACGCACC GAATGGCAAA TGGAGGGATT GTTGAATCCC GTCCGATCAA TCGCAATGCC CTCAGCCTCC CGTAAGCGTG ATCGTCGGCT TGAAGCCGGT GAACTTGATC GACTGTTAGT TGAGCTGAGG AAATCACGGA ACGAATATGT TGTCCCGGCG GTCCTGTTCG CAATTGAAAC CGCCATGCGG CAAAGTGAAA TTCTTAGTTT GCGCACTCAG GACATTGACA GAGAAAAGCA GACTGCTTAT CTGAAAGACA CTAAAAACAA CGAACCCCGG GTGGTGCCGC TGTCCAGAGC GGCTATGGGC ATACTCGATA CAATGCCCCT CCCCTTGCAT GGTGGTAGGC TTTTTAGTGT CACTCAAGAC GGTTTAATTC GAGCGTTTTC TCGTTCGGTG ACTCAAGCTC GCAATGTGTA TATCGAAGAT TGCATATCTG CCAATGCGCA ACCTGATGAT CACTTTCTGA ATAACCTGAA ATTCCATGAC TTACGTCACG AGGCTACGAG TCGTTTTTTT GAGACTGGGA ATCTTGAAAT GATGGAGGTT GCGCAAATTA CTGGCCATAA AACAATTACC ATGCTCTCGC GATATACCCA CCTCCGTGCG GAGGATCTGG TGGCAAAGCT TGGATAA
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Protein sequence | MAYIQKRGDY QWRVQIRRKG HPTQCKTFFT RKEADAWARL IESEMDRGVF FSRVEAESTS LAEALERYRK EVTSRKKSAH REGVRINFWL THPLSSRMLA SFRGADFARF RDDRRKEGIS DSTIRLDLAL ISHVFTIART EWQMEGLLNP VRSIAMPSAS RKRDRRLEAG ELDRLLVELR KSRNEYVVPA VLFAIETAMR QSEILSLRTQ DIDREKQTAY LKDTKNNEPR VVPLSRAAMG ILDTMPLPLH GGRLFSVTQD GLIRAFSRSV TQARNVYIED CISANAQPDD HFLNNLKFHD LRHEATSRFF ETGNLEMMEV AQITGHKTIT MLSRYTHLRA EDLVAKLG
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