Gene Hneap_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0969 
Symbol 
ID8534111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1043195 
End bp1044241 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content50% 
IMG OID646383350 
Productintegrase family protein 
Protein accessionYP_003262854 
Protein GI261855571 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.23183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATACA TTCAGAAACG TGGTGATTAC CAATGGCGGG TTCAAATCCG CCGTAAGGGG 
CATCCGACCC AATGCAAAAC CTTCTTCACG CGCAAAGAGG CTGATGCGTG GGCTCGGCTC
ATCGAGTCTG AAATGGATCG AGGTGTATTC TTCAGCAGGG TTGAGGCAGA GAGCACCTCG
TTGGCGGAAG CGCTGGAACG TTACCGTAAA GAGGTCACAA GCAGGAAGAA GAGCGCGCAT
CGTGAGGGAG TGCGGATTAA TTTCTGGCTG ACCCACCCTC TTTCAAGTCG GATGCTGGCC
TCTTTTCGTG GTGCCGATTT TGCCAGATTC AGGGATGACC GCCGGAAAGA AGGCATTTCT
GATTCCACGA TCAGACTTGA TCTTGCTCTC ATCTCCCATG TGTTCACCAT CGCACGCACC
GAATGGCAAA TGGAGGGATT GTTGAATCCC GTCCGATCAA TCGCAATGCC CTCAGCCTCC
CGTAAGCGTG ATCGTCGGCT TGAAGCCGGT GAACTTGATC GACTGTTAGT TGAGCTGAGG
AAATCACGGA ACGAATATGT TGTCCCGGCG GTCCTGTTCG CAATTGAAAC CGCCATGCGG
CAAAGTGAAA TTCTTAGTTT GCGCACTCAG GACATTGACA GAGAAAAGCA GACTGCTTAT
CTGAAAGACA CTAAAAACAA CGAACCCCGG GTGGTGCCGC TGTCCAGAGC GGCTATGGGC
ATACTCGATA CAATGCCCCT CCCCTTGCAT GGTGGTAGGC TTTTTAGTGT CACTCAAGAC
GGTTTAATTC GAGCGTTTTC TCGTTCGGTG ACTCAAGCTC GCAATGTGTA TATCGAAGAT
TGCATATCTG CCAATGCGCA ACCTGATGAT CACTTTCTGA ATAACCTGAA ATTCCATGAC
TTACGTCACG AGGCTACGAG TCGTTTTTTT GAGACTGGGA ATCTTGAAAT GATGGAGGTT
GCGCAAATTA CTGGCCATAA AACAATTACC ATGCTCTCGC GATATACCCA CCTCCGTGCG
GAGGATCTGG TGGCAAAGCT TGGATAA
 
Protein sequence
MAYIQKRGDY QWRVQIRRKG HPTQCKTFFT RKEADAWARL IESEMDRGVF FSRVEAESTS 
LAEALERYRK EVTSRKKSAH REGVRINFWL THPLSSRMLA SFRGADFARF RDDRRKEGIS
DSTIRLDLAL ISHVFTIART EWQMEGLLNP VRSIAMPSAS RKRDRRLEAG ELDRLLVELR
KSRNEYVVPA VLFAIETAMR QSEILSLRTQ DIDREKQTAY LKDTKNNEPR VVPLSRAAMG
ILDTMPLPLH GGRLFSVTQD GLIRAFSRSV TQARNVYIED CISANAQPDD HFLNNLKFHD
LRHEATSRFF ETGNLEMMEV AQITGHKTIT MLSRYTHLRA EDLVAKLG