| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0952 |
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| Symbol | |
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| ID | 8534094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1020949 |
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| End bp | 1022808 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646383335 |
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| Product | Beta-ketoacyl synthase |
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| Protein accession | YP_003262839 |
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| Protein GI | 261855556 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGAT TCCCTGTTAT TGTCGGTTTT GGAGGTGTGA ACGCCGCCGG TCGGAGTAGT
TTTCACCATG GTTATGGGCG TATTGTTGCT GAGGCTATGC CAGCCGAAGT GACTGAACGT
ACTGTTCAAT CGTTGGCAAG ACTGATGAAC CTTGATTTGA CCACAGATAG AAGGGAACTG
TTTCGCCTTA TTGAAGCGGG TACATTGGTA CGTAAAATTG AGTCTAATCA TTTCGATCCA
GACAACATGT TCTCATATCA GCACGTTCAA TTGTCGCCTG ACGTCCCGTT GGAGTTTGTT
TGTCAACGAG ACAGTCTTCC GAAAACCATG CCTCATGGCT GGCAGGTAAC ACCGCTGAAC
GAAGTACAAG TCAAGGTAAG TGTTTCCAAT TCCGCTGCCG TCGCTGTTCC ATTAGGTTAT
GAATCAAGGG TCAAAGTGGC TGGGCAATTG CCAACTGGTT TTAATCCGGG AGCGGGATAT
GCCTCACATC ACCATCCTCG TGGTATACAG ATGACAGTTT TTGGCGCATC AGATGCTCTA
CAGTCAATCG GGATAGAATG GGACGTCATC AGAAGCAAGA TCAAGTCCGA GGAAGTTGGT
GTCTACGCAG GGTCGGCTAT GGGGCAACTC GATAAATGGG GAACTGGCGG CATGATAAGT
GCTCGTTGGT TGGGGCGGTC GCCGAGTTCC AAGCAATGTG CTCTTGGTTT TTCTCAAATG
CCTGCTGACT TCATTAATGC CTATTTGCTT GGCAACATTG GTCTCACCCG TTCGAATATG
GGGGCCTGTG CCTCTTTCCT TTACAACCTG CAACTTGCTG TCCATGACAT TCAAGTGGGT
CGTGTGCGAG TGGCTGTGGT TGGGAGCAGT GAAGCACCAA TTCTGCCAGA GGTCGTTGAA
GGCTATGGAG CCATGAGTGC GCTTGCTACC GACGAAAAAC TATGCGCCCT CGATCATGCA
CGTGGTTTGG TCACACCGAA CTATCGGCGT GCAAGTAGAC CTTTCGGGGA TAACTGTGGA
TTTGTTCTTG CAGAGTCTGC GCAGTTTGTC GTGCTGTTTG ACGATACTCT GGCGCTTGAA
ATGGGGGCGA CAATTCATGG GGCGGTGAGT GATGTGTTCG TTCATGCAGA TGGATATAAG
CGCTCGATCG CATCCCCCGG TGTTGGTAAT TACATTACAT TGGCACGTGC AGTCGCCTCT
GCTAAGGCAT TACTTGGTGA TGCGGCTGTT CGTCATCGTA GCTTTGTGCA GGCGCATGGT
AGTAGTACGC CACAAAATCG TGTGACTGAA TCACATATTC TTAGTGAAAC GGCTCGTGCA
TTTGGAATTG AGAATTGGCC AATTGCGGCT ATGAAAAGTT ATCTTGGTCA TTCACTCGCC
GCTGCAGCTG GGGATCAAGT CATCGCTAGT CTGGGTGTTT GGGCTCACGG TGTAATTCCA
GGGATTACAA CAATAGATAG ACCGGCAGAG GATGTTCATC GGGATCGTTT GGATATCTCC
CCAGAGCACA AAGTGGTTGG TGCAGAGAAT ATTGATGTAG CTATTGTAAA TGCCAAGGGA
TTTGGCGGAA ATAATGCTAG CGCGGCGCTC ATCGCCCCTC GAGTTGTTCA GAATTTGTTG
GATCGTCGCC ACGGCTCTAC TGCGATACTG AAGTACTGGA AGCAAAATGA GGCTGTGCAG
GAGTCGGCCG CTTGTTATGA GAAAGCCATT CTGGCTGGCC AGGACAAAAC GATTTATCGA
TTCGGTACGC ATGCTTTAGA TGATAAAAGT GTCCATCTAA GCTCTGATGG GGTGAGTATT
GATGGATATT CACCAATTTT GTTTGATAAG GGAACGAGGT ACTCGGATTT GGATTATTGA
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| Protein sequence | MVRFPVIVGF GGVNAAGRSS FHHGYGRIVA EAMPAEVTER TVQSLARLMN LDLTTDRREL
FRLIEAGTLV RKIESNHFDP DNMFSYQHVQ LSPDVPLEFV CQRDSLPKTM PHGWQVTPLN
EVQVKVSVSN SAAVAVPLGY ESRVKVAGQL PTGFNPGAGY ASHHHPRGIQ MTVFGASDAL
QSIGIEWDVI RSKIKSEEVG VYAGSAMGQL DKWGTGGMIS ARWLGRSPSS KQCALGFSQM
PADFINAYLL GNIGLTRSNM GACASFLYNL QLAVHDIQVG RVRVAVVGSS EAPILPEVVE
GYGAMSALAT DEKLCALDHA RGLVTPNYRR ASRPFGDNCG FVLAESAQFV VLFDDTLALE
MGATIHGAVS DVFVHADGYK RSIASPGVGN YITLARAVAS AKALLGDAAV RHRSFVQAHG
SSTPQNRVTE SHILSETARA FGIENWPIAA MKSYLGHSLA AAAGDQVIAS LGVWAHGVIP
GITTIDRPAE DVHRDRLDIS PEHKVVGAEN IDVAIVNAKG FGGNNASAAL IAPRVVQNLL
DRRHGSTAIL KYWKQNEAVQ ESAACYEKAI LAGQDKTIYR FGTHALDDKS VHLSSDGVSI
DGYSPILFDK GTRYSDLDY
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