Gene Hneap_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0887 
Symbol 
ID8534028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp957314 
End bp958975 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content57% 
IMG OID646383272 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003262777 
Protein GI261855494 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACC CACTTCTAAT GATGGCTGGC CTTGCAGCGC TGGCTACCGC AACGATGGTT 
TCAACCGGCG CTTTTGCCGC GGATGCAACC CAAAAATCAA TCAATGTTCC GGCCGTGAGC
ATGCTCGTGG TGTTCGTGGT GCTGACTCTG TTCATCACCT GGTGGGCCGC GCAACGCACG
CGCACCACCA AGGACTTCTA TGCCGCCGGT GGCAATATCA CAGGCTTTCA GAATGGTCTG
GCTCTGGCGG GCGATTACAT GTCTGCCGCC TCGTTTCTCG GGATTGCCGG TCTGGTCTAC
GCCAACGGTT TCGATGGCCT GATCTACTCC ATCGGCTTTC TGGTCGGCTG GCCGATCATG
CTGTTCCTGC TGGCGGAAAA ACTGCGCAAC CTCGGTAAAT ACACTTTTGC CGATGTCGCC
TCCTACCGCC TCTCGCAGAT CCCGATTCGC AGTGTTGCCG CCGTATCATC ATTGATTGTG
GTTGCCATGT ACCTCATCGC GCAGATGGTC GGTGCCGGCA AACTGATCGA GATTCTGTTC
GGCCTGCCGT ACAACTACGC GGTGGTGATC GTCGGCGTAC TGATGATTCT GTACGTCACC
CTGGGCGGCA TGTTGGCGAC GACTTGGGTA CAAATCATCA AGGCGGTACT GCTGCTCTCC
GGCGCTACCT TCATGGCGCT GGCCGTGCTG TATGCCTTCG GTTTCGATTT CAACGCAATG
TTCGCCAAGG CCATCGAAAT CAGCCCGAAA CACGACGCCA TCATGGCACC CGGCAGCTTG
ATCCACGACC CGATCTCCGC CATTTCACTC GGCTTGGCAC TGATGTTCGG TGTGGCTGGC
TTGCCGCACA TTCTGATGCG TTTCTTCACC GTAACCAACG CGAAAGAAGC ACGTAAATCC
GTGTTTGTCG CCACGGGCTT TATCGGTTAC TTCTATGTGT TGACGTTCAT CATCGGCTTT
GGTGCCATCA TCATGGTGTC CACCAATCCC GCCTATCTCG ATGCGGCACA GAAGCTGATC
GGTGGCAACA ACATGGCCGC CATCCACTTG TCGCATGCCA TCGGCGGCAA CATCTTCCTG
GGCTTCATCT CAGCCGTCGC GTTTGCCACC ATTCTGGCGG TAGTTTCCGG CCTGACCTTG
GCCGGCGCCT CAGCGGTATC GCACGATTTG TATGCCAGTG CCTTCCGCCA CGGCCGAGTG
GATGAAAAAA CCGAGATGCG CGTTTCCCGC TATGCCACCA TCACCCTGGG TATTCTGGCT
ATTTTCCTCG GCATCGCCTT CGAGAAGCAG AACATTGCCT TCATGGTGGG CTTGGCCTTC
GCGATTGCCG CCTCGGCCAA CTTCCCGATT TTGTTCCTAG CGATTTACTG GAAGAAGCTG
ACGACTCGCG GCGCCGTGAT GGGTGGCCTG GGTGGTCTGT TGACGGCCGT CATCCTGGTT
ATTCTCTCCA AGAGCGTATG GGTGGATGTG CTCGGCTACT CTAAAGCGAT CATGCCGTAT
GCTTATCCGG CCATCTTCTC GATGCCGGTG GCGTTTGTAT TCGCGTGGTT CTTCTCGATC
ACCGACAACA GCACGCGCGC CGTTGAAGAA CGCGCCCGCT TCCACGCTCA ATATGTGCGT
TCGGAAACCG GCATCGGTGC AGAAGGTGCT GCAAAGCACT GA
 
Protein sequence
MKNPLLMMAG LAALATATMV STGAFAADAT QKSINVPAVS MLVVFVVLTL FITWWAAQRT 
RTTKDFYAAG GNITGFQNGL ALAGDYMSAA SFLGIAGLVY ANGFDGLIYS IGFLVGWPIM
LFLLAEKLRN LGKYTFADVA SYRLSQIPIR SVAAVSSLIV VAMYLIAQMV GAGKLIEILF
GLPYNYAVVI VGVLMILYVT LGGMLATTWV QIIKAVLLLS GATFMALAVL YAFGFDFNAM
FAKAIEISPK HDAIMAPGSL IHDPISAISL GLALMFGVAG LPHILMRFFT VTNAKEARKS
VFVATGFIGY FYVLTFIIGF GAIIMVSTNP AYLDAAQKLI GGNNMAAIHL SHAIGGNIFL
GFISAVAFAT ILAVVSGLTL AGASAVSHDL YASAFRHGRV DEKTEMRVSR YATITLGILA
IFLGIAFEKQ NIAFMVGLAF AIAASANFPI LFLAIYWKKL TTRGAVMGGL GGLLTAVILV
ILSKSVWVDV LGYSKAIMPY AYPAIFSMPV AFVFAWFFSI TDNSTRAVEE RARFHAQYVR
SETGIGAEGA AKH