Gene Hneap_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0885 
Symbol 
ID8534026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp955144 
End bp955875 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID646383270 
ProductPeptidase S24/S26A/S26B, conserved region 
Protein accessionYP_003262775 
Protein GI261855492 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTCAT CCGGTCGTTC ATCACCCCCC AAAAAGCGAC GTGCCGATGC CAACGGGCAT 
GGCGGTGCGC GTTCTGGGGC GGGGCGGCCC AAGGGTCAGG GACGTTGGGG CGAGCCCACG
GTGCCGGTTC GGGTGCCGCA AAGCCGGGTT ACTGTGGTCA AGGCTTTACT GGATACCTTG
CCCGCTGTGA ATGGCGAGGA CCAAAAACCC CCAAATCAAG TGGGCGATAT GCCAGTCATT
ACCCGTGCGA GGGCCAGTAC GAAACCGCTT TCACCGGATG CCTGGTCTGA TTTGCTGACC
GCATCGGGGT TGATCCCGCT GCAACCGGCC ACTGTGGCGC CCGTGTTGAC GTTGCCCCTG
TTCGGTTATC GGATTGCGGC AGGGTTTCCT TCCCCAGCCG ATGATTATGT CGAGGAGCGC
ATCGACCTGA ACCGGCATTT GATCCGGCAC AAGGAAGCCA CGTTCTTTCT GCGCGTGCAG
GGGGATTCGA TGATCAATGC CGGGATTCAC GATGGCGATA TGCTGATTGT CGATCGGGCC
ATCGAGCCGG TATCGGGCAA GATCGTGATT GCGGCGCTGG ATGGAGAGCT CACGGTCAAG
CGGTTATCGG CCAGTGGCGG CGTGGTGCGC CTGTTGCCGG AAAACCCGGA TTACCCGGTG
ATCGAGATCG GTGCGGAGCA GGAGTTGGTG GTCTGGGGTG TGGTGATTCA CGTCATCCAC
GCGCTGGGCT GA
 
Protein sequence
MDSSGRSSPP KKRRADANGH GGARSGAGRP KGQGRWGEPT VPVRVPQSRV TVVKALLDTL 
PAVNGEDQKP PNQVGDMPVI TRARASTKPL SPDAWSDLLT ASGLIPLQPA TVAPVLTLPL
FGYRIAAGFP SPADDYVEER IDLNRHLIRH KEATFFLRVQ GDSMINAGIH DGDMLIVDRA
IEPVSGKIVI AALDGELTVK RLSASGGVVR LLPENPDYPV IEIGAEQELV VWGVVIHVIH
ALG