Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0881 |
Symbol | |
ID | 8534022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 950780 |
End bp | 951610 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383266 |
Product | ABC-2 type transporter |
Protein accession | YP_003262771 |
Protein GI | 261855488 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCC AAAAGGAACT GCCCATTTCC GGAGAATTCA CCCGTCCGGC CCAAGGCATG AGCGCCCGGC AGATGACCAA TGCCTTTTTC ATGTTGGTAT CGCGTGAAAT TTTGCGTTTT GGCCGCATCT GGCTGCAAAC GATATTGCCG CCCATGATCA TGACCTCGTT GTATTTCGTG GTGTTCGGCC ATCTAATCGG CCCGCGCGTC GGTGAAATCG ATGGCGTGCC CTACATCAAC TATCTCGTGC CCGGCCTGAT TCTGATGGCG GTGATTACCC AAAGTTACGC CAATGTGGTC TCGTCATTTT ACGGCGCGAA ATTTGCGCGA CACGTTGAAG AGCTGCTCGT CTCACCCATG CCGCACTGGC TGATTATCCT CGGCTATTTG GCAGGGGGTG TGGCGCGTGG GCTGTCGGTC GGCGCGGCCG TTACCTTGGT CGCGTTGTTT TTCGCCGATT TGCAGGTGCA CGATGTGTTG GCTTTAATTC TCGTGGCCGC ATTGACCTCG GCGGTGTTCT CGCTCGGTGG CATGATTAAC GCCATTTATG CCAATAGTTT CGACCATATT TCCATCGTGC CGACCTTCGT GCTGACGCCG CTTACCTACC TCGGCGGTGT GTTCTACTCC ATCCACATGT TGCCGCCGTT CTGGCAGCAG GTGTCGATGT TCAACCCGAT TCTCTACATC ATCAACGGTT TTCGTTATGC CATGCTGGGC ATCAGTGATG TGCCTGTCTA CACGGCTTAT TTGATTTTGC TGGTGACCAT TGTGGTTCTG TTTGCCTATA CCTTGCGCCT GTTCCGCAAG GGCATTGGCA TGCGGGGCTA A
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Protein sequence | MKTQKELPIS GEFTRPAQGM SARQMTNAFF MLVSREILRF GRIWLQTILP PMIMTSLYFV VFGHLIGPRV GEIDGVPYIN YLVPGLILMA VITQSYANVV SSFYGAKFAR HVEELLVSPM PHWLIILGYL AGGVARGLSV GAAVTLVALF FADLQVHDVL ALILVAALTS AVFSLGGMIN AIYANSFDHI SIVPTFVLTP LTYLGGVFYS IHMLPPFWQQ VSMFNPILYI INGFRYAMLG ISDVPVYTAY LILLVTIVVL FAYTLRLFRK GIGMRG
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