Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0873 |
Symbol | |
ID | 8534014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 944496 |
End bp | 945218 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646383260 |
Product | ABC transporter related protein |
Protein accession | YP_003262765 |
Protein GI | 261855482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATCTTC AGGTTCGTGC CGGTGAGATC GTCGCGCTTC TCGGCCCGAG TGGATCAGGG AAAAGCACGC TACTCCGCTG CATCAATCGA CTCGAAACCT GGAACTCGGG TGACGTGTTT ATTGGTGGGC ATCGGATCGG GTATTCGTCA GGTGGCCTTG TTCTGTCGCC AAGTGAAGTG GCCCGGCAGC GCGTCGAAGT CGGTGTCGGC ATATTGTTCC AGCATTTCAA TCTATTCGCG CACCTGACTG CGGAAGAGAA CATCGCCGGA CCGTTGCGCT GGGTTCATGG CTGGTCGCAA GAGGCGGCGG CACAACGAGC ACAGGAATTG CTCGATCGAG TTGGCCTCGG TGACCGTGGG GATGCCCTGC CTCGTCATCT GTCGGGCGGG CAGCAACAAC GTGTGGCGAT TGCACGGGCT ATCGCTCCGG GAGCCAAAGT ACTCCTGCTT GACGAGCCGA CCCCTGCACT TGATCCGGAA ATGGTCGGAG AAGTGCTGGA TGTCATTCGT AGGCTCGCCT TTGAGGAAAA ACTCACCATG ATCATTTCCA CTCATCAATT GAGGTTCGCT GAGGAAGTCG CCGATCGCGT CATCTTCCTC ACCGATGGAA ATATCGTTGA GGATGGCCCC GCCTATGAGG TGCTTAGCCA ACCACGCAAT CCACTGACGG CCCGCTTCAT CCGTGTGATG AGTTCCGGCC AGACCTCAGC GCTCGCGCTG TGA
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Protein sequence | MDLQVRAGEI VALLGPSGSG KSTLLRCINR LETWNSGDVF IGGHRIGYSS GGLVLSPSEV ARQRVEVGVG ILFQHFNLFA HLTAEENIAG PLRWVHGWSQ EAAAQRAQEL LDRVGLGDRG DALPRHLSGG QQQRVAIARA IAPGAKVLLL DEPTPALDPE MVGEVLDVIR RLAFEEKLTM IISTHQLRFA EEVADRVIFL TDGNIVEDGP AYEVLSQPRN PLTARFIRVM SSGQTSALAL
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