| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0856 |
|---|
| Symbol | |
|---|
| ID | 8533997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 927403 |
|---|
| End bp | 928344 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646383243 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_003262748 |
|---|
| Protein GI | 261855465 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.46878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGT TAATCGACCC CGCTGTTGCT CACGCCAGAA CGATCACCCC AGCCGTGCGC
GTAGAAGCCG AAAAACTCTA TCGCGCCTGC TGTGACATCG GGTTTTTCAC CGTGAAGAAC
ACCAATCTGT CCACAGAAGA GTTCGTGGAC ATATTCACGC TGGCCCACCG GTTCTTCGCC
CAGCCGCTTG AAGAGAAGAT GCGCATCAGC ATCGAAAACT CGTCGCATCA CCGGGGTTAC
GGAAAGGTAG GCGCGGAGCA GTTGTCGCCC GAAACCCCAG CGGATTTCAA AGAAACTTTC
GACATGTCCC GCGACCTGGG CCCGACGCAT CCCGGGGTGC GGGCGGGCGA TCTTTTCTAC
GGCCCAAACC AGTACCCTCA ATTTGAGGGT TTCAAGGAGA CTGTTGAACG GTATTACCAG
CGGTTGAGCG AAACGGGTCT GAATCTACTG GCACTGATGG CGGTATCGCT GGAACTACCG
ATTGATTACT TCGATCCGCT GTTCGACGAC CAGACCAGCG TACTGCGCAT GATTCACTAT
CCGCCGGTAA CAGACGCAGG ACAAATTAGT GCCGGAGTTC ACACGGACTA TGGTTGCCTC
ACCCTGCTGG CGCAGGATGC CGTGGGTGGG CTTGAGGTCA AACCCCGAGG GCAGGACTGG
ATTCGCGTTC CTTACGAACC GGACATGCTG GTGGTAAATA TTGGCGATCT CATGCAGCGC
TGGAGCAACG ATGTGTTTCA GTCGACGCCG CACCGGGTCG TGCCGCCACT GGGCGTCGAT
CGCTATTCGA TCCCATTCTT TCTCGAACCG AATACGAAAA CCCGGGTGGC ATGCTTCGAC
TCGTGCGTGA CGCCCAAAAC GCCGTGCCGG TATGAACCCA TCTTTTCGGA TGACTGGATC
ACGTCCCGCT TTAATCAGAC GTACGCGTAC CGACAGAAAT AA
|
|---|
| Protein sequence | MLPLIDPAVA HARTITPAVR VEAEKLYRAC CDIGFFTVKN TNLSTEEFVD IFTLAHRFFA
QPLEEKMRIS IENSSHHRGY GKVGAEQLSP ETPADFKETF DMSRDLGPTH PGVRAGDLFY
GPNQYPQFEG FKETVERYYQ RLSETGLNLL ALMAVSLELP IDYFDPLFDD QTSVLRMIHY
PPVTDAGQIS AGVHTDYGCL TLLAQDAVGG LEVKPRGQDW IRVPYEPDML VVNIGDLMQR
WSNDVFQSTP HRVVPPLGVD RYSIPFFLEP NTKTRVACFD SCVTPKTPCR YEPIFSDDWI
TSRFNQTYAY RQK
|
|---|
| |