Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0855 |
Symbol | |
ID | 8533996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 926686 |
End bp | 927402 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383242 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003262747 |
Protein GI | 261855464 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.894475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAA CAGCTGAACA GACCACGGTA AAACCTGTCG CGACGAAATA TGTGTACGAC GCGCTGAAGG AAAAAATCCT CAGTTTTGAG ATCTATCCGG GTAGCCGGGT GACCGAATCT GAACTGGCAG ATTTGTTCAT GGTGAGTCGC ACGCCCGTTC GCGAAGCGCT GCTTCGGCTG GAAAACGAAG GCTTCCTGAC TATCCGGCCG AAACAAGGAT GTTTCATCAA GCCGATCAAT ATCGAGGAAC TGGGCGAGTA CTACGGCGTG CGCACGGCGC TTGAAGTGGC GGCGGTCGAG GGGGCTTGTC ATTACATGCC GGAAAGCGAG TTGCAGCATT TGCTGCATCT GTGGTCGCCC GACCAGGCAT TGGTGGAGCA CAGTGCCGAT CAGATGGAAG ATAAGGACGA GTCGTTTCAT ATTGCCTTGG CTCTCGGTAG TGGAAATTCG ACGCTTGTCC GATACCTTCA AGACGTCAAC GATCACATTC GCATCATCCG CCGCGTGGAC TTTCAAGACG AAGAGCGGAT CAAGCGAACC TATGCCGAAC ACCACGCGAT CATCGAAGCA ATTCTCGGCC GCGAGGTCGA TAAGGCCCGC AACCTGATGA AGCGTCACAT CCAGCGAAGC CAGGACTTCG CCAAAACCCT CACCCTGACG CAATTGGCTA AGAAGAAGGC GGGTGTCAGC CGTTTCGAAC AGGTGAAAGC GTTGTGA
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Protein sequence | MKQTAEQTTV KPVATKYVYD ALKEKILSFE IYPGSRVTES ELADLFMVSR TPVREALLRL ENEGFLTIRP KQGCFIKPIN IEELGEYYGV RTALEVAAVE GACHYMPESE LQHLLHLWSP DQALVEHSAD QMEDKDESFH IALALGSGNS TLVRYLQDVN DHIRIIRRVD FQDEERIKRT YAEHHAIIEA ILGREVDKAR NLMKRHIQRS QDFAKTLTLT QLAKKKAGVS RFEQVKAL
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