| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0846 |
|---|
| Symbol | |
|---|
| ID | 8533987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 917496 |
|---|
| End bp | 918890 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646383233 |
|---|
| Product | amidohydrolase, AtzE family |
|---|
| Protein accession | YP_003262738 |
|---|
| Protein GI | 261855455 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.566975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA GCTTTCCATT CACGGCAACC GAATGCGTCG ATGCTTTTAC CCGGGGCGAC
TGCTCGGCCG TTGAAATCGC CGAAGCGACC CTAGCACGGA TCGAAATGGT GAACTCGACG
CTGAATGCCT TCACGGAAAT CACGGCACCG CGGATGCGTA GGGAAGCAGA ACTGGTAGAC
AGCGCCAGGC GGCAGAACCA GCCGCTTGGG CCGCTGGCTG CCGTGCCCTA TGCCGTCAAG
AATCTGTTCG ATGTCGAGGG CATCACCACG CTCGCCGGCG CGAAACTGTA CGAGCAGTGT
CCACCAGCAA GCCGGGACGC GGATCTGGTC AACAAACTCA ACCGGGCAGG TGGTCTTTTG
GCAGGCACCC TGAACATGGA CGCCTACGCC TACGGATTTA CCACCGAAAA CAGCCATTAC
GGCGCCACTC ATAATCCGCG CAACACGACA CGTTCGGCGG GTGGTTCCTC CGGTGGGACC
GGGGCGGCGG TGGCGGCAGG ACTGGTGCCG ATCGGGCTGG CCAGCGACAC CAACGGTTCC
ATTCGTGTTC CCTCGTCGCT TTGCGGGGTG TTCGGCCTCA AACCCACCTA CGGGCGCTTG
TCTCGAACCG GTACCCAGAT GTTCGTTTCC AGTCTGGATC ACCTCGGACC ACTTGCGACC
ACGACGGAAG ATCTCGCCCT GGCATACGAT GCCCTGCAAG GCTCCGATCC GCTCGATCCT
GCCTGTGCCC TGCGTCCCAT CGAACCCACC CGACGCGGAC TCAATCAAGA CATCGACGGC
CTGCGCATCG CTCGACTGAC CGGCTATTTC GATGAGCATG CCGGCCCGCA AGCCCTTTGG
GCAAGCCAGA CCGCTGCACG GGTACTGGGC GCTTCACGCG AAATCGAATT GCCCGGTGTC
GCAGCGGCTC GGTCCGCGGC GTACCTGATC ACCGCATCGG AAAGCGGCGC CCTGTATCAG
GATCGCCTGC GCACGCAGAT CGATCTATTC GAACCGCTAT CGCGGGATCG ACTGATCGCC
GGTTCGCTGA TACCGGCTGC TTGGTATCAA CAGGCATTGC GTTATCGGCG CTGGTATCTG
GAGCGAGTGA TGCATCTGTT CCGTGATGTT GACGTGCTGA TCGCCCCCGC CACGCCCATC
ACCGCGCCCT TGCTTGGACA GCCCAGCTTC ACACTCGGCA ATCGAGAATT CGCCACTCGA
CCCAACATGG GCTTGCTGAC CCAGCCCATT TCCTTTATCG GTTTGCCGGT TGCCATCGCG
CCGCTCTGGC CCGAGGGTGG TCTGCCCATG GGTTTGCAAA TTATCGCGCC GCCGTGGCGG
GAGGATTTAT GCCTGCACGT GGCGCGGGTG CTGGAACAGA CCGGCCTAGC CAGTAGCAGA
ACACCGCGGG GTTGA
|
|---|
| Protein sequence | MNTSFPFTAT ECVDAFTRGD CSAVEIAEAT LARIEMVNST LNAFTEITAP RMRREAELVD
SARRQNQPLG PLAAVPYAVK NLFDVEGITT LAGAKLYEQC PPASRDADLV NKLNRAGGLL
AGTLNMDAYA YGFTTENSHY GATHNPRNTT RSAGGSSGGT GAAVAAGLVP IGLASDTNGS
IRVPSSLCGV FGLKPTYGRL SRTGTQMFVS SLDHLGPLAT TTEDLALAYD ALQGSDPLDP
ACALRPIEPT RRGLNQDIDG LRIARLTGYF DEHAGPQALW ASQTAARVLG ASREIELPGV
AAARSAAYLI TASESGALYQ DRLRTQIDLF EPLSRDRLIA GSLIPAAWYQ QALRYRRWYL
ERVMHLFRDV DVLIAPATPI TAPLLGQPSF TLGNREFATR PNMGLLTQPI SFIGLPVAIA
PLWPEGGLPM GLQIIAPPWR EDLCLHVARV LEQTGLASSR TPRG
|
|---|
| |