| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0826 |
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| Symbol | |
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| ID | 8533967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 896874 |
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| End bp | 899135 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646383214 |
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| Product | CRISPR-associated helicase Cas3 |
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| Protein accession | YP_003262719 |
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| Protein GI | 261855436 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.650204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA TTCAACATAT TGCGCACGCC AAGCAAGATC TAGACGGTAA CTGGAACGCC
CCGCATGACC TTGTCGATCA CCTGAATTGT GTGGCAATGC GAGCAGCCGA TCACGCGCGG
CCTTTCGGTG GGCAAGAATG GGCTCATCTG GCGGGTTTAT GGCACGATCT GGGCAAGTTT
CGACCAAGGT TCCAGCAGTA CATTCGCAAA GCAAGCGGCT TTGATTTCAA TGCCGATGCC
TCTATCAAAG GCGAGGCTGG TAAAGCCCCT CACTCAACTG CGGGCGCGCT GCTGGCCTGT
GATCGTTTCA AGGAATCGGG ACGAGTGCTG GCCTACCTCA TCGCGGGACA TCACGCCGGT
CTCTACGACT GGCATTCTGA GTCTTCCAGC CTCGAATACC GATTACAGCA AGTGGACTCC
CGCGAAGAGC TTGATCAGGC TTTAGCTGAG AACCCACCCG CCGAGATTAT CAAACATAGA
ACGTTCACTC CCGACATGCG CACCATTCCC GGCGGCAAGG ACGGCTTTGC CTTATGGGTG
CGAATGTTGT TCTCATGTCT GGTGGATGCT GACTTTCTCG ACACCGAGTC TTACATGGAC
ATGGACAAAT CCGCACAGCG GGGTGATTGG CAGGGCATGC AAAAACTGCT CGAACAATTC
GATAAGTTCA TGGCTCGCAA AACATTCGCG GCGGAGCCAA CGCCAGTCAA CCAGCTACGC
ACCGACATCT TGCGGCAGTG TCGTGAGAAG TCACACGAAC CCCCTGGCCT GTTCTCACTT
ACTGTGCCGA CCGGCGGCGG CAAAACGCTT TCCAGCATGG CTTTTGCACT GGAACATGCA
AAGCGGAACA ACAAGCGCCG CATCATTTAC GTCATCCCGT ACACCAGTAT CATCGAGCAA
ACCGCCGACA TTTTTCGGGA CATATTTGGC GAGGCTGTGA TTGAACATCA CAGCAATGCT
GAAGTTGATG CCAATAAAGA AAATAGCAGG AGTCGTCTCG CTTGCGAAAA CTGGGACGCG
TCGATTGTCG TCACCACCAA CGTGCAATTT TTCGAATCGC TGTTTGCGGC GAAGACATCG
CGCTGTCGCA AGCTGCACAA CATCGTCGAT AGCGTCGTGG TGATGGATGA GGCGCAGTTA
ATACCCGCAG AATTCCTGCA ACCCATTCTT GACGTGCTGA ATCTTTTGAC GCTGCACTAC
GGCGTTACCG TCGTGCTCTC CACCGCTACC CAACCAGCTT TGGCTACGCG TGAATATTTC
GATGCCAAAA ACAACATGCG CGGCCTAGAG AATGTTCGTG AAATCATGGA CGACCCGGAT
GCGCTCTACG CCCAACTGGA ACGGGTCAAT GTACGTCTGC CTACCGACTG GAACACGCCG
ACCAGTTGGG ACACGCTGGC CAACGAGATC AAACAGCACA ATTCCGTACT CACCATCGTC
AACCGCCGCA ATGATGCACA CGAATTGTGG GATTTGATGC CGGAAGGCAC GCTACATCTA
TCGGCGCTGA TGTGCGGTGA ACACCGCTCG CAAGTTATCA AGCAAATCAG GGCTCGGCTT
AAAGAGCGTG TTCCCACGCG CGTTATCAGC ACGCAACTGG TCGAAGCCGG TGTCGATGTG
GATTTTCCGG TGGTTTATCG CGCATTGGCC GGATTGGATT CGATCGCCCA GGCAGCCGGG
CGTTGCAACC GGGAAGGCAA ACTGGAGAGG GGCGAAGTCG TGGTGTTCGT GCCACCCAAA
CCCGCGCCGC CCGGCCTGTT GCGCAAAGGT GAGGATGCTT GCCGCAGCGT GCTTCATAAC
CGCACTGGCA AGCCACTTGA ACGCGACTTG TTTGCCAGAT ATTTCGAGAA GCTTTATCAC
GCTTGCGATC TGGATGCGCA AAACATCACG AAATTGCTTG AGGTCGATGG ACAAACGCTG
GCCGTCAACT TCCGCACCGC CGCCGACAAA TTCAAACTCA TCAAAGATGA AGACAGCGCA
CCTGTCATCG TTCGTTATCG TGGCGTGGAT GGCAACGATG ACAAGGTGGA CGAACTGCTG
AACACCTTGA GAAAGCATGG CTCTGAGCGC TGGCTCATGC GTAAACTCCA ACGTTACACG
GTGACGATCC ATCGCCGTGA AATCATTAAA CTGTTGTCGC AAGGCGATGT TGAGGAAATT
CTACCGGGCT TGTACATCCA AATTAGTGAT TGGCTCTATC ATCCAATTCT TGGGCTTAAC
CCAAATGGCG CGCCCGCGAA GTTAACCAAT TTCATTGTAT AA
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| Protein sequence | MEKIQHIAHA KQDLDGNWNA PHDLVDHLNC VAMRAADHAR PFGGQEWAHL AGLWHDLGKF
RPRFQQYIRK ASGFDFNADA SIKGEAGKAP HSTAGALLAC DRFKESGRVL AYLIAGHHAG
LYDWHSESSS LEYRLQQVDS REELDQALAE NPPAEIIKHR TFTPDMRTIP GGKDGFALWV
RMLFSCLVDA DFLDTESYMD MDKSAQRGDW QGMQKLLEQF DKFMARKTFA AEPTPVNQLR
TDILRQCREK SHEPPGLFSL TVPTGGGKTL SSMAFALEHA KRNNKRRIIY VIPYTSIIEQ
TADIFRDIFG EAVIEHHSNA EVDANKENSR SRLACENWDA SIVVTTNVQF FESLFAAKTS
RCRKLHNIVD SVVVMDEAQL IPAEFLQPIL DVLNLLTLHY GVTVVLSTAT QPALATREYF
DAKNNMRGLE NVREIMDDPD ALYAQLERVN VRLPTDWNTP TSWDTLANEI KQHNSVLTIV
NRRNDAHELW DLMPEGTLHL SALMCGEHRS QVIKQIRARL KERVPTRVIS TQLVEAGVDV
DFPVVYRALA GLDSIAQAAG RCNREGKLER GEVVVFVPPK PAPPGLLRKG EDACRSVLHN
RTGKPLERDL FARYFEKLYH ACDLDAQNIT KLLEVDGQTL AVNFRTAADK FKLIKDEDSA
PVIVRYRGVD GNDDKVDELL NTLRKHGSER WLMRKLQRYT VTIHRREIIK LLSQGDVEEI
LPGLYIQISD WLYHPILGLN PNGAPAKLTN FIV
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