| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0819 |
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| Symbol | |
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| ID | 8533960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 891222 |
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| End bp | 892256 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646383207 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003262712 |
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| Protein GI | 261855429 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03640] CRISPR-associated endonuclease Cas1, DVULG subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.606535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACACAG TCCAAAACAC ACTCTACATT ATGACCCCCA ATGCTTATGT GCATCTGGAG
AATGCCACAG TGCGCATTGA TGTTGAGCGC GAAAAAAAGC TTCAGGTGCC ACTGCACCAT
CTAAATGGGC TCGTTTGCTT TGGCAATATC ATGATCTCGC CTGCACTGAT GCATCGCTTG
GCAGATGATG GCAAATCATT GGTATTAATG GATAGTTCAG GGCGATTCAA GGCGCGTCTT
GAAGGCCCGG TTTCAGGGAA TATCTTGCTG CGGCAAGCGC ATCACCGCCA AGCATCCGAT
GCTGCCTTTG CGCTGGAAAT AGCGCGCACC ATCGTGTCAG GCAAACTCAA AAACAGTCGC
AGCGTCGTGC AGCGTGGCGC ACGCGAAACC AGTGATACCA TCGAAACAAC CCAGCTCACG
CGCAGCGCCG ATAATCTTGC TGCTTCATTG CGTGCTGCTG CGGCAGCCAC CTCAATGGAC
GAACTCCGAG GCATTGAAGG CGAAGCGGCT CGCGGCTACT TCTCCGCCAT TAATCTGATC
GTCAAGACGG CCATGCGCGC CAATTTTCAG CTCAATGGTC GCACTCGCCG CCCGCCACTG
GATCGTTTTA ACGCCCTAAT TTCCTTTCTC TACGCCATGC TTATGAATGA TTGCCGTTCC
GCAATCGAAG CGACCGGACT CGATGCCCAG TTAGGCTTTC TGCACGCCGT TCGTCCAGGG
CGTGCCGCAC TGGCACTTGA TCTGATGGAA GAATTTCGCG CTATTGCCGC TGACCGTCTT
GCTCTCACGC TCATCAACCG GGGCCAGATC AATGCCAGCG ATTTTGACGA ACGAGAAGGG
GGCGCCGTGA TGCTTAATGA CAGGGGCCGT CGTGCCGTTG TCACCGCTTG GCAAGAACGC
AAGCAAGAAA TAGTCACCCA CCCGCTCACA GAAACAAAGA TCCCCATTGG CCTGCTCCCT
TTCATTCAGG CGCGGTTCTT GGCGCGCACC ATCCGTGGTG AAATGGATGG CTATCTACCC
TATCAGTCAA AGTGA
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| Protein sequence | MHTVQNTLYI MTPNAYVHLE NATVRIDVER EKKLQVPLHH LNGLVCFGNI MISPALMHRL
ADDGKSLVLM DSSGRFKARL EGPVSGNILL RQAHHRQASD AAFALEIART IVSGKLKNSR
SVVQRGARET SDTIETTQLT RSADNLAASL RAAAAATSMD ELRGIEGEAA RGYFSAINLI
VKTAMRANFQ LNGRTRRPPL DRFNALISFL YAMLMNDCRS AIEATGLDAQ LGFLHAVRPG
RAALALDLME EFRAIAADRL ALTLINRGQI NASDFDEREG GAVMLNDRGR RAVVTAWQER
KQEIVTHPLT ETKIPIGLLP FIQARFLART IRGEMDGYLP YQSK
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