Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0795 |
Symbol | |
ID | 8533934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 861408 |
End bp | 861854 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383183 |
Product | transcriptional regulator NikR, CopG family |
Protein accession | YP_003262691 |
Protein GI | 261855408 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATC TGAATCGAGG AGCATTGAGC CGGATCAGCA TCTCGCTGCC TTCCCGCTTG CTGGCGGAAC TGGACAAAAT GGTGCTCAAA CGCGGTTTTG ATAGCCGTTC GCAAGCCATT GTCGAGATGA TCAACCAGCA GTTGGTCGAG CATAAGTCCG ACCTGGGGTT TGATGTCATG GCTGGCACGA TCAACCTCGT CTACGACCAT TCGACCACGA ATCTGCAAAA GGAACTGGCC GATCTTCAGC ATAAGTACAT CGACGAGGTG ATCAGTTCCT TGCACGTGCA CCTGATGGAC AACCAGACGA TGGAAGTCAT CCTGGTTCAG GGGCCGGCAA CGAAACTGCA AATGATCGCC GACCAGATGA TCAGTTGCAG TGGGGTGATT ACGGGGCGCT TACAGCTGAC GACCACGCAA ATGCCGCCGT TACACCCATT GACCTAA
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Protein sequence | MNDLNRGALS RISISLPSRL LAELDKMVLK RGFDSRSQAI VEMINQQLVE HKSDLGFDVM AGTINLVYDH STTNLQKELA DLQHKYIDEV ISSLHVHLMD NQTMEVILVQ GPATKLQMIA DQMISCSGVI TGRLQLTTTQ MPPLHPLT
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