| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0717 |
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| Symbol | |
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| ID | 8533854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 779872 |
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| End bp | 780591 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383103 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_003262613 |
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| Protein GI | 261855330 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR01637] phage transcriptional regulator, ArpU family
[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTGC GAGCCATGTA CACCGATGTG CAGCGTGGTG GTGCCGAAGC AGTGGTTGCC
GAACACGCAG GGTTGGTTAA ACGTATCGCA TTCCATTTGA TGAACCGGCT ACCCGACCAT
ATTCAGGCGG AAGACTTGAT TCAGGCGGGT ATGATCGGTC TGCTCGAGGC ATCTAACCAT
TACGATGCCG CTCAAGGTGC ATCATTTGAA ACTTATGCCG GCATCCGCAT TCGTGGCGCC
ATGCTTGATG AAGTGCGTCG CAACGACTGG GCACCCCGCT CGGTCCATCG GCGTCATCGG
GAAATCTCTC AGGCCGTGCA CGAAATCGAA ACGCGCACAG GTTGCGAGGC CAAGGATGCC
GATGTGTGCG CACTCCTGGG TATCAGCCTC GATGATTATT ACGAAGCACT GAACGACTCG
GTTCAGGTGC GCCTTGCTCC ACTCGACGCC GGGGGAGAAG ATCACAACGA AACCATCGAT
GTTGCCGATC ACCGGGATCA ACCGGATCAA TATCTGAGCC ATGAGCGTTT CCATGAAGAC
CTTGCTGAGC ACATCTCAGC ATTGCCTGAA CGCGAGCGAC TGGTGATGTC GCTCTACTAC
GTCGATGAGT TGAATCAAAA GGAAATCGGT GCGGTACTCG GGGTGTCTGA ATCACGCGTT
TGCCAGATTC AAAACAAGGC TATCTTGCGT TTAAAATCTT CACTGAAAGA TTGGCGTTAA
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| Protein sequence | MNVRAMYTDV QRGGAEAVVA EHAGLVKRIA FHLMNRLPDH IQAEDLIQAG MIGLLEASNH
YDAAQGASFE TYAGIRIRGA MLDEVRRNDW APRSVHRRHR EISQAVHEIE TRTGCEAKDA
DVCALLGISL DDYYEALNDS VQVRLAPLDA GGEDHNETID VADHRDQPDQ YLSHERFHED
LAEHISALPE RERLVMSLYY VDELNQKEIG AVLGVSESRV CQIQNKAILR LKSSLKDWR
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