Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0712 |
Symbol | |
ID | 8533849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 773399 |
End bp | 774175 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383099 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_003262609 |
Protein GI | 261855326 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACTTT CCTTAGCGGA AGTCATGGGA TGGGTGGGGA GCTATGTCTG GGTCCTTGTC CGGGTGGCTG CATTGCTGAT GGTGGTGCCG ATATTCGGCG CGCGGGGTGT GCCCAAGCGC TGGCGCATTC TCGCCGCCCT GGTGTTCAGC CTCATCATTG CGCCGACGCT ACCCCCCGTC CCTACGATCG ACCCATTATC AGTAGCCGGT ATATTGCTGG TGGCGCAGCA GATCATCATC GGCGTCACCA TGGGATTTGT CCTGGGGTTG ATCGTGAGTT CATTTGTGGT CGCCGGTGAA TCCATGGCAT TGGGCATGGG GCTTGGCTTC GCGCAAACGG TCGATCCGCA AAACGGCGTC AGCGTGCCGA TTGTGTCCCA GTTCCTCACG GTGGTGGCCA CCTTGCTGTT TATCTCGCTC GATGGCCCGG CATTGATCGT CAAAATGCTG GCGGATTCGT TCGTCTGGCT GCCGATTGCG CCGGTGGGGC TTTCGCCAGA AACGTTCTGG CGTGTCGTCG GTTTCGGGCA ATCCATGTTT ATCAACGCCA TTTTGATTGC CTTGCCGGTC ATTATCAGCC TGTTGATGGT CAATCTGGCG ATGGGCGTAA TCACGCGCGC CGCACCGCAG CTCAACATTT TTTCGATCGG TTTTCCTGCC ACTTTGCTTA TCGGCTTCTT CCTGATTCTG GTTTCAAGCC CGACCTGGGT GCCAATTCTG GAACACTTCC TGCAACAGAC ACTGCAATTC ATTAGTGATC TGTTGAGGCA ACCTTAG
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Protein sequence | MILSLAEVMG WVGSYVWVLV RVAALLMVVP IFGARGVPKR WRILAALVFS LIIAPTLPPV PTIDPLSVAG ILLVAQQIII GVTMGFVLGL IVSSFVVAGE SMALGMGLGF AQTVDPQNGV SVPIVSQFLT VVATLLFISL DGPALIVKML ADSFVWLPIA PVGLSPETFW RVVGFGQSMF INAILIALPV IISLLMVNLA MGVITRAAPQ LNIFSIGFPA TLLIGFFLIL VSSPTWVPIL EHFLQQTLQF ISDLLRQP
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