Gene Hneap_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0712 
Symbol 
ID8533849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp773399 
End bp774175 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content56% 
IMG OID646383099 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_003262609 
Protein GI261855326 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACTTT CCTTAGCGGA AGTCATGGGA TGGGTGGGGA GCTATGTCTG GGTCCTTGTC 
CGGGTGGCTG CATTGCTGAT GGTGGTGCCG ATATTCGGCG CGCGGGGTGT GCCCAAGCGC
TGGCGCATTC TCGCCGCCCT GGTGTTCAGC CTCATCATTG CGCCGACGCT ACCCCCCGTC
CCTACGATCG ACCCATTATC AGTAGCCGGT ATATTGCTGG TGGCGCAGCA GATCATCATC
GGCGTCACCA TGGGATTTGT CCTGGGGTTG ATCGTGAGTT CATTTGTGGT CGCCGGTGAA
TCCATGGCAT TGGGCATGGG GCTTGGCTTC GCGCAAACGG TCGATCCGCA AAACGGCGTC
AGCGTGCCGA TTGTGTCCCA GTTCCTCACG GTGGTGGCCA CCTTGCTGTT TATCTCGCTC
GATGGCCCGG CATTGATCGT CAAAATGCTG GCGGATTCGT TCGTCTGGCT GCCGATTGCG
CCGGTGGGGC TTTCGCCAGA AACGTTCTGG CGTGTCGTCG GTTTCGGGCA ATCCATGTTT
ATCAACGCCA TTTTGATTGC CTTGCCGGTC ATTATCAGCC TGTTGATGGT CAATCTGGCG
ATGGGCGTAA TCACGCGCGC CGCACCGCAG CTCAACATTT TTTCGATCGG TTTTCCTGCC
ACTTTGCTTA TCGGCTTCTT CCTGATTCTG GTTTCAAGCC CGACCTGGGT GCCAATTCTG
GAACACTTCC TGCAACAGAC ACTGCAATTC ATTAGTGATC TGTTGAGGCA ACCTTAG
 
Protein sequence
MILSLAEVMG WVGSYVWVLV RVAALLMVVP IFGARGVPKR WRILAALVFS LIIAPTLPPV 
PTIDPLSVAG ILLVAQQIII GVTMGFVLGL IVSSFVVAGE SMALGMGLGF AQTVDPQNGV
SVPIVSQFLT VVATLLFISL DGPALIVKML ADSFVWLPIA PVGLSPETFW RVVGFGQSMF
INAILIALPV IISLLMVNLA MGVITRAAPQ LNIFSIGFPA TLLIGFFLIL VSSPTWVPIL
EHFLQQTLQF ISDLLRQP