| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0710 |
|---|
| Symbol | fliP |
|---|
| ID | 8533847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 772258 |
|---|
| End bp | 773082 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 646383097 |
|---|
| Product | flagellar biosynthesis protein FliP |
|---|
| Protein accession | YP_003262607 |
|---|
| Protein GI | 261855324 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.823404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG AAAAGATGAG CCGACTACCT GCATCGCGTT TCGGGTGGCT CTTGTTGTTG
ATTGCAGGAT TATTTCTCTG CACCACCCAT CTGGCACACG CCGCGCCTGC GGTGACTCAG
GCGATGGCCG CACCGGGTTT GCCGGCGGTC ACGCTGACGA CAGACGGCGC TCAAACCCAG
TACAGCCTGA CTTTGCAGAT TCTGGCGTTG ATGACGGTGC TGACTTTGCT GCCGTCGTTG
CTGCTGCTGA TGACTTCGTT TACTCGGATC ATTATCGTGT TATCCCTGAT GCGCCAAGCG
TTGGGGCTGA CACAAACACC ATCGAACCAG ATTCTGATCG GCCTCGCGCT TTTTTTGACG
CTGTTCATCA TGGCGCCGGT GTTTCAGAAA TCGTATGACG AGGGCATCAA GCCCTATATG
GATCAGAAAA TTACGGCAAA TGTTGCCATC GAAAAAGCGG CGGAACCTCT GCGAACATTC
ATGCTCAACC AGACCCGCCA GTCGGATATC GCATTGTTCC AGAACATTGG TCATTACCCG
GCCTTTGAGA CGCCAAAGGA TGTGCCGTAC ACCGTACTGA TGGCTGCGTT CATCACGTCG
GAACTGAAAA CTGCATTCGA GATTGGTTTT TTGATTTTCA TTCCCTTTTT GATCATCGAT
CTTGTCGTGG CGTCGGTCCT GATGTCGATG GGGATGATGA TGCTTTCACC CATGATCGTG
TCCTTGCCCT TCAAGCTCAT GCTATTCGTC CTAGTGGATG GCTGGACGCT GATCATGGGC
ACACTGGCGT CGAGCTTTTA TATGGGTGCA CCTCTTGGCA GTTAG
|
|---|
| Protein sequence | MSNEKMSRLP ASRFGWLLLL IAGLFLCTTH LAHAAPAVTQ AMAAPGLPAV TLTTDGAQTQ
YSLTLQILAL MTVLTLLPSL LLLMTSFTRI IIVLSLMRQA LGLTQTPSNQ ILIGLALFLT
LFIMAPVFQK SYDEGIKPYM DQKITANVAI EKAAEPLRTF MLNQTRQSDI ALFQNIGHYP
AFETPKDVPY TVLMAAFITS ELKTAFEIGF LIFIPFLIID LVVASVLMSM GMMMLSPMIV
SLPFKLMLFV LVDGWTLIMG TLASSFYMGA PLGS
|
|---|
| |