| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0694 |
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| Symbol | |
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| ID | 8533830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 757057 |
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| End bp | 757905 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646383081 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003262592 |
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| Protein GI | 261855309 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC GTTACGGGGT GATTGGCAAT CCCATCGCCC ACAGCCGGTC GCCGTTGATC
CATCGCGCCT TTGCCGAACA AACCAGCATC GATCTGGCTT ACACCGCGAT TCTGGCGGCT
TTGGATGGAT TTGTCGCCAC CGTGGAAAAC TTTCGCAGCG AAGGTGGGCT GGGGCTGAAC
GTGACCGTTC CCTTCAAGAG CGAAGCCTTT GCCTTGTGCC ATACACTGAG CGAACGGGCA
CAACGTGCGG GGGCCGTCAA CACGCTGATT TTTCCGACAG ATCCCTCGTC TTCCGATATT
CTGGGCGACA ACACCGATGG CGTGGGTTTG CTGCGTGACC TCGCGTTCCA CCAGATTCCC
CTCAAAGGCA AAAAAATCCT GCTGCTCGGC ACGGGTGGTG CCTCGCGTGG CGTGCTCGCG
CCGCTGCTAG CCGAAATTCC GGCTCGGTTG CTCATCGCCA ACCGCCGCGT GGCCACAGCC
GAACAACTGG CGACTGATTT TCAAGATGTG TCTGGCGGGC ACACGCAGCT TGGTGGCTGT
GCATTGGATG CCCTGCCCGC CGAGCCGTTT GATCTTATTA TCAACGCCAC CTCCGCCAGC
CTGACCGGTG AACAGCTTGC CCTGCCAGAC GCGTTGATCG GCCCAAACAC CACCGTCTAC
GACATGGCTT ATGGCCGTGA ACCCACCGTA TTCATGCAAT GGGGCGCGGC TTTGGGCGCA
TTCGCCCTCG ATGGACTGGG CATGCTGGTC GAGCAAGCGG CCGAGAGTTT CTATTTGTGG
CATGGCATTC GGCCGCAAAC TAATCACGTG CGGGATTTGC TCAAGGCATC ACTTGATCCG
GCTTGTTAA
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| Protein sequence | MTARYGVIGN PIAHSRSPLI HRAFAEQTSI DLAYTAILAA LDGFVATVEN FRSEGGLGLN
VTVPFKSEAF ALCHTLSERA QRAGAVNTLI FPTDPSSSDI LGDNTDGVGL LRDLAFHQIP
LKGKKILLLG TGGASRGVLA PLLAEIPARL LIANRRVATA EQLATDFQDV SGGHTQLGGC
ALDALPAEPF DLIINATSAS LTGEQLALPD ALIGPNTTVY DMAYGREPTV FMQWGAALGA
FALDGLGMLV EQAAESFYLW HGIRPQTNHV RDLLKASLDP AC
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