| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0666 |
|---|
| Symbol | |
|---|
| ID | 8533802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 724514 |
|---|
| End bp | 725305 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646383054 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_003262565 |
|---|
| Protein GI | 261855282 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTCCTC CTCATTTATC CCCGAACGAT TCGATCATCG ATGATTGGTG GTTGGTGTTG
CCTGCGGCCG GGATGGGGCG GCGCATGGGT GCCGATCAAC CCAAGCAGCA TTTGAAGGTT
GATCAACGGA CTCTGGTTGA AGTCACCCTG TCTCGTTTCA TCGGCTTGCC CGGGTTGAAA
GGGGCTGTGT TGGCATTGGC GCCAAACGAT GAACTGACGC CGAAGCTTCT GGCGTCCTTT
TCAGCTTTCC CGCTCCACTT CACCGCAGGT GGTGCCACCC GCTCAGATAG CGTGTTGGCT
GCATTGAACT ATCTTTCTGG CCAACTGGCG GTTGACTGGC AGCATTGGGT ATTGGTGCAT
GATGCCGCAC GCCCCTGTGT TCGGCCTGCC GATGTGCACA AGCTGCTCGA AGCAGTCCGT
GGTTCAAATG CGGGTGGTTT ACTGGCGGTA CCCGTGCGGG ATACGCTGAA ACAAGCAGAT
GAACGCAACC GGGTTTCGAT GACCGTTCCA CGCGACGGGG TGTTTCATGC GCTCACGCCC
CAGGCGTTCA GGCTTGGGGC TTTGGCTGAT GCGATGGATC GTGCGCATCA GGATGGTGTG
ACCCTCACGG ACGAATCCTC GGCGATGGAG CATGTCGGTA TGAAACCGTT ACTGGTGAAA
GGTCATGCCG ATAACCTCAA GATCACGCAT CCCGATGATT TGCCGTTGGC AAGATTGATC
TTGCAGGCCC AGTCCGCCAT CCAGGCCGCC ACTCAGTCAG CCTGGATTGG TGACAAGTTA
ACTCCTGAAT AA
|
|---|
| Protein sequence | MIPPHLSPND SIIDDWWLVL PAAGMGRRMG ADQPKQHLKV DQRTLVEVTL SRFIGLPGLK
GAVLALAPND ELTPKLLASF SAFPLHFTAG GATRSDSVLA ALNYLSGQLA VDWQHWVLVH
DAARPCVRPA DVHKLLEAVR GSNAGGLLAV PVRDTLKQAD ERNRVSMTVP RDGVFHALTP
QAFRLGALAD AMDRAHQDGV TLTDESSAME HVGMKPLLVK GHADNLKITH PDDLPLARLI
LQAQSAIQAA TQSAWIGDKL TPE
|
|---|
| |