| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0656 |
|---|
| Symbol | |
|---|
| ID | 8533792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 710959 |
|---|
| End bp | 711789 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646383044 |
|---|
| Product | protein of unknown function DUF1342 |
|---|
| Protein accession | YP_003262555 |
|---|
| Protein GI | 261855272 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.514378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCATG GCGGCACATT CGATTTAATC AAAGATGCCA TGAAAGAACA GTTTACCGGG
GCAAGCTTTC TGAAAAACTT CGAACAACCT TTGAATGAAC GGATTCGTGC CTGTCTCAGG
CTGGAGTATC TGTTCGATCG CTTCGATCAG CACTTGGCAG ACGAAACTGC CGAGGGTTCG
TTGTGTGCGA TGCTCATTCT GATCGAAGCC ACCGATGTGC TCGGGCGAAT TGATGTTAAA
CGGGAACTCA TCAAGGAACT GGAGCGCCAA CAGGCCAAGC TGCTTCAGGT AGCGCACACG
CCGCAGGTCA ATGCCGAAAT GCTGAATCAG TTGCTGGATC AGCAGGCGCA ATTGCTCGAT
CAACTCCACC GGATGAACAC GCAACCGGGG GCACACCTGA AAAAACACGA GCTGATCAAT
GCCATTCGTC AGCGCGCTTC GATCCCCGGC GCCTTGTGTG TTTTCGACTT GGCAGCGTTG
CACTACTGGC TGGCGCAGCC TTATTCAGAG CGAAGGGAAG ACTTTCTGGA GTGGCTGGAA
CCCCTCGCCA CCATCCGCAG AGCAAATGAG CTGGTCATCG ACCTCATCCG CAACAGCGTA
GCTCCGGAAA TCCGAACGGC GGAGGATGGC TTTTTTCAAT TGAATCTGGA ACTGGGAACA
CCGTATCAGC TGGTTCGCGT TCTTTTGGAT GATGGCAGCA ATGTGTATCC AGAAATTAGC
GCCAGCAAAC ATCGCGTCAT CGTCCGCTTC ATGCGACTCG ACCGCCAGAC AGGGCATCCT
TTTCAGGTCA ATCACGATGT CGCTTTCGAA TTGGCGATCT GTCAGTTATA A
|
|---|
| Protein sequence | MVHGGTFDLI KDAMKEQFTG ASFLKNFEQP LNERIRACLR LEYLFDRFDQ HLADETAEGS
LCAMLILIEA TDVLGRIDVK RELIKELERQ QAKLLQVAHT PQVNAEMLNQ LLDQQAQLLD
QLHRMNTQPG AHLKKHELIN AIRQRASIPG ALCVFDLAAL HYWLAQPYSE RREDFLEWLE
PLATIRRANE LVIDLIRNSV APEIRTAEDG FFQLNLELGT PYQLVRVLLD DGSNVYPEIS
ASKHRVIVRF MRLDRQTGHP FQVNHDVAFE LAICQL
|
|---|
| |