Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0648 |
Symbol | |
ID | 8533784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 699454 |
End bp | 701460 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646383037 |
Product | helicase c2 |
Protein accession | YP_003262548 |
Protein GI | 261855265 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACACGG AAGCGGCGGA CACACTGTCC ACGGCACCTA CGCCTTCAAA ACCAAGCACG CTGCAAGACG TCTTTGGTGA AAGCGGGGTT CTTGCCGCTG CGTTCAGTGG TTATCAGCCG CGCGCGGGCC AGTTGCAAAT GGCCGAGATC ATCCGCGACG CCATCACCGA TTCGCGTACC GTCGTGATCG AAGCGGGCAC CGGGGTGGGC AAAACCTTCG GTTATCTCGC CCCGATTCTG CTCGCCGGTC GCAAAGCGAT CGTGTCCACC GGCACCAAGC ATTTGCAGGA TCAGATCTTC AGCCGGGACT TGCCGCAAAT CAAGCAACTG ATGGGTTCGA CCACGCGCAC GGCACTGCTC AAAGGGCGCT CGAACTACCT GTGCCTGCAC CGCTTGGAAC GCGCGATGAC CGAAGGGCGG CTCAAAAGCC CGGACTGGGT CACGGCGCTG CACACCATCA AGGGTTGGAG CACACGTACG CGCGACGGCG ACATTGCCCG TTGCGATGCC GTGAGCGAAG AGCATGGCAT CTGGCCACTG GTTACCTCCA CCAACGAGAA TTGTCTGGGC AAGGAATGCC CGGTCTTCGA TGAGTGCTTT GTGGTGAAAG CCCGCGAGGC CGCGCATGAG GCCGATCTCG TGGTCATCAA CCATCATCTG TTTTGCGCCG ATATTGCCAT TCGCCAGAGC GGCTTTGCCC AACTGTTGCC TGAAGCGGAT GTGGTGGTCT TGGATGAAGC CCATCAACTG CCAGAGATCG CCAGCTTGTT TTTCGGTTCG GCCCTCAGCA GCGGGCAGAT GATTGATCTG TTGCGCGATA TCGTGCGCGA ACAACAGGCC GAAGCGGTAG ACATGTCCGA TCTGCTTGGC GTGGTGCATC AATTTGAATT GGCCATAGAT CCTTGCGTTT TGGCACTGAA AAATGCCCGC ACCGACCGCA TTGCCTGGCA GGAATTGCGG GAGGATAAAA CCATTCAAGC GGCTTTCGAT ACGCTCGAAA CCCGACTAGC CGACCTGACC GCCGCGCTGG AACTCGCCGC GCCGCGTGGC AAGGGTTTAG CCAGCTGCCA TGAACGCGCC ATACAAATGC GCCAATCGCT GTCGCATTTC CGCCGCAGCG AGGAAATCAC AACTGAAGTC CGCTGGCTCG AACGCCGCGA GAAATCCTTT ACCCTCAACA TCACGCCGAT GGATGCGGGC CAAACATTCT CAGATGTGGT TGAAAGCCAG CCGCGCGCCT GGGTGTTTGC ATCAGCCACG CTCGCTGCGG GCAAGGATTT TTCCCACTTC ACCCGCCGTT TGAATTTGAA TCTCGCGCTG TGCCAGCAAA CACCCTCGCC CTTCGATTAT CCGAATCAGG CGATTATGTA TCTGCCACCG AACCCGCCGG ACCCCAAAAC AGACCCCGAC TACACGCTCA AGATTTTGCG TGCCGTGTTC CCGGTGCTCA AGGCCAGCGG CGGGCGGGCC TTTTTGCTGT TCACGAGCCA TCGCGAGCTG AAGAAAGCCG CCGATATTTT GGAAGGCAAA CTGCCGTTTC CGTTGTTTGT GCAAGGCACG CAGGCCAAGG CGGCCTTGCT TGAACAGTTC CGGCAATCGG GCAACGGCGT GTTGCTCGGC ACGCAGAGTT TCTGGGAAGG CGTGGATGTG CGCGGTGAGG CGTTGTCTGT TGTGATGATC GATCGCATCC CCTTCGCCTC GCCCGATGAC CCAGTTCGCC GCGCCCGTGA GGCACAAATC AAGGAATCGG GTCATTCACC GTTCGCGGCC ATGGCCTTGC CCGAAGCCAT TATCACCTTC AAACAGGGCG TGGGCCGGTT GATTCGCGAT GTCACCGACC GAGGCGTGCT CGTGCTCTGC GACCCGCGCT TGCAGCGCAC CGGCTTTGGT CGACAAATAC TGGATGCCCT GCCGCCGATG CGCCGCAGTC ACTCAATCGA TGAGATACAC GATTTCTTCC AATACGATCA AGCGACCAAT GCGCTCAAGG CAAGCAAGGC AGAATAA
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Protein sequence | MNTEAADTLS TAPTPSKPST LQDVFGESGV LAAAFSGYQP RAGQLQMAEI IRDAITDSRT VVIEAGTGVG KTFGYLAPIL LAGRKAIVST GTKHLQDQIF SRDLPQIKQL MGSTTRTALL KGRSNYLCLH RLERAMTEGR LKSPDWVTAL HTIKGWSTRT RDGDIARCDA VSEEHGIWPL VTSTNENCLG KECPVFDECF VVKAREAAHE ADLVVINHHL FCADIAIRQS GFAQLLPEAD VVVLDEAHQL PEIASLFFGS ALSSGQMIDL LRDIVREQQA EAVDMSDLLG VVHQFELAID PCVLALKNAR TDRIAWQELR EDKTIQAAFD TLETRLADLT AALELAAPRG KGLASCHERA IQMRQSLSHF RRSEEITTEV RWLERREKSF TLNITPMDAG QTFSDVVESQ PRAWVFASAT LAAGKDFSHF TRRLNLNLAL CQQTPSPFDY PNQAIMYLPP NPPDPKTDPD YTLKILRAVF PVLKASGGRA FLLFTSHREL KKAADILEGK LPFPLFVQGT QAKAALLEQF RQSGNGVLLG TQSFWEGVDV RGEALSVVMI DRIPFASPDD PVRRAREAQI KESGHSPFAA MALPEAIITF KQGVGRLIRD VTDRGVLVLC DPRLQRTGFG RQILDALPPM RRSHSIDEIH DFFQYDQATN ALKASKAE
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