Gene Hneap_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0647 
Symbol 
ID8533783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp698414 
End bp699451 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content58% 
IMG OID646383036 
Producthypothetical protein 
Protein accessionYP_003262547 
Protein GI261855264 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain
[TIGR00341] conserved hypothetical protein TIGR00341 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTTA AGGTACTGGA GATTATTTCA CCCAAGGCCG AGATTGAGGC CATCGAACAG 
GTCACCAACA GCGACGAGGT GGTGGACTGG TGGCGCTCCT CGCCGTTTGA TGATGAACGC
TTTTCCACCA GCATGATGGT GAAACCCGAC AACGTGCAAA CGGTTTTGGA TGCGCTGCAA
CAAATCCTCG ACCACTGCAA AGATGCCCGC GTGATGATTC ACAGCGTGGA CGCGACCCTG
CCGAAAATCG AAGAGGAAGA GGAACCCGAC CCGCAGACCG AAGAAGAACC CGGCAAAAGC
AACGGATTGA CCCGCGAGGA GTTGTTCGAG CAAGTCGAAA CCGGTAGCGA ACTCAATCAG
ACGTATTTGC TGCTGACGGC ACTCTCAGCC ATTGTCGCGG CCATCGGCAT GGTCGAAAAC
AGCGTGGCCG CCGTGATTGG CGCGATGGTG ATTGCCCCCT TGCTCGGGCC CAATCTTGCG
CTGGCGCTCG GCTCGACGCT GGGCGAAACC ACACTGACCC GAAAAGCGAG CATCGCCAAT
CTGGTGGGGT TGGGGCTGGC CATTGGGGTT GCTTTTCTCA TCTCGTTTTT GATCGATCCG
ACCAGCAATG CGCAGTTGGA AGCACGCACC GTCGTGTCCT ATGGCGCCTT GATTCTCGCA
TTGGCCTCCG GTGCTGCCGC CGTGCTCTCC CTGCTGGCCG GCGTGGCGAC CGGACTTGTG
GGCGTGATGG TCGCGGTGGC TTTAATGCCG CCAGCCGTGG CGCTGGGTTT GTTTCTGGGC
TGGGGCCAAT GGACCCAGGC TGGCCAGGCG TTGCTGCTGC TGTTCATCAA CATTACGGCC
ATCAATTTAT CGGCCAAGCT GATTCTCGTT TTTCGTGGCG TAACGCCCCG ACGCTGGCCC
GATAAAAGCC GCGCCAAAAA ATCATCGCGC TGGGCATTTA CGTTCTGGGG GCTGTCGATC
GGCATCATTA TTGTGCTGAT CTACTTCGCC CAACATGGAC TAAAAGACCT CGCACCGATC
TTCGAGTGGT TGCGTTGA
 
Protein sequence
MGLKVLEIIS PKAEIEAIEQ VTNSDEVVDW WRSSPFDDER FSTSMMVKPD NVQTVLDALQ 
QILDHCKDAR VMIHSVDATL PKIEEEEEPD PQTEEEPGKS NGLTREELFE QVETGSELNQ
TYLLLTALSA IVAAIGMVEN SVAAVIGAMV IAPLLGPNLA LALGSTLGET TLTRKASIAN
LVGLGLAIGV AFLISFLIDP TSNAQLEART VVSYGALILA LASGAAAVLS LLAGVATGLV
GVMVAVALMP PAVALGLFLG WGQWTQAGQA LLLLFINITA INLSAKLILV FRGVTPRRWP
DKSRAKKSSR WAFTFWGLSI GIIIVLIYFA QHGLKDLAPI FEWLR