Gene Hneap_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0624 
Symbol 
ID8533760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp673053 
End bp674459 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content50% 
IMG OID646383013 
Productflagellar hook-associated 2 domain protein 
Protein accessionYP_003262524 
Protein GI261855241 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACTA CGGTATCTAC CACGAGTTCG ACCTCCCCAA GTGGAATTTC CTTTTCCGGA 
CTGGGTTCGG GTTTGGATAT TCAGGGCATC GTCACACAAT TGGTGAATGC TGAGGGAGCA
CCCCAGCAGC AAATTCTCAC GAATCGGCAA ACAGCCTTCA ATACGACTTT GTCGGCACTC
GGTCAGCTTA AGAGTAGTTT GTCGAGTATC CAGACGGCGG TTGACGCATT TCAAAATCTG
GATACTTTCC GGACACGGAC GGCGACAGTT TCCAATAGCA GTATTTTGAG TGCTTCTGCT
ATTCCCGGAA CGGCGCTAGG GACTTATCAG GTTGAAGTGG ATCAATTGGC CACAGCACAG
AAGATGGCTT CGGCTGGTTA TGCTTCGGCA ACGAGTACTG TGGGATCCGG GACACTTAAC
TTTACTGTCG GTAGTGGCTC ATTCTCTGTC AGTGTTGCGG CCACCGATAC CCTCACGAAT
ATTCGGGATA ACATCAATGC TGCCACTGGC AACACGGGTG TGCAGGCGTC AATCATCAAT
GTGGATAATG GCAGTGGCGG AACAGTTTCT AAGTTGGTGA TGACCGCGCT GAATACGGGC
ACGAGTAATG GCTTCACGGT TACCGCAGTG GATTCTGATG GCAATAACAC GGATGCCGTC
GGATTATCTG CTCTTGCATC CAACAACCTG ACGCAAATTA GTGCGGCTCA AGATTCCATC
ATTAAAATCG ATGGTATGCA GGTAACCAGT GCATCCAATA GTGTGAGTAC GGCCGTTACC
GGTTTGACTT TGAATCTCAC GCAGGCTCAA GTGGGTACCA GCGTGGCGGT GACGGTGGGG
ACGGACAACA GCCCCATCAC CACCGCGTTA CAGACGTTGG TGACCAATTA CAACAAATAT
CAGTCAACCA ATGCCAGTCT GACCTCTTAT GATCAGACCG CTAATCAGGC TGGGGCGTTG
TTGGGCGATG TGACAGCCAC TGGGGTCAAC AATGCCTTGC GTTCACTGAT GGGGCAGAAT
TACACAACGG GCAGCACTAC CATTCAAAAC CTGGCGGATA TCGGCATTCA AGTGGACAAG
AATGGAGTGA TGTCGCTGGA TACCACCAAG TTGAATCAAG CTCTTGCCGC TGATCCTAAT
GTGGTCAAGA CGTTGCTGAC CGACCCAACG AATGGTGTGA GTGCCAAAGT AGACAGCGTG
CTCAATCCTT ATTTGCAATA TAACGGCGTC TTTGATTCCC GCACGGCAAG CATCAATAGC
CAATTGAAAA CAATCACGAC GCAGCAGGCT GATCTACAAG CTCGCTTGAA TCAGTATCAG
ACATCGTTGA TGGCACAATT CACCGCGATG GATTCTTATG TTGCTCAGAT GAATCAATCG
ATGAGTTTTC TGTCGAAACT GAACTGA
 
Protein sequence
MSTTVSTTSS TSPSGISFSG LGSGLDIQGI VTQLVNAEGA PQQQILTNRQ TAFNTTLSAL 
GQLKSSLSSI QTAVDAFQNL DTFRTRTATV SNSSILSASA IPGTALGTYQ VEVDQLATAQ
KMASAGYASA TSTVGSGTLN FTVGSGSFSV SVAATDTLTN IRDNINAATG NTGVQASIIN
VDNGSGGTVS KLVMTALNTG TSNGFTVTAV DSDGNNTDAV GLSALASNNL TQISAAQDSI
IKIDGMQVTS ASNSVSTAVT GLTLNLTQAQ VGTSVAVTVG TDNSPITTAL QTLVTNYNKY
QSTNASLTSY DQTANQAGAL LGDVTATGVN NALRSLMGQN YTTGSTTIQN LADIGIQVDK
NGVMSLDTTK LNQALAADPN VVKTLLTDPT NGVSAKVDSV LNPYLQYNGV FDSRTASINS
QLKTITTQQA DLQARLNQYQ TSLMAQFTAM DSYVAQMNQS MSFLSKLN