| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0616 |
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| Symbol | |
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| ID | 8533751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 661782 |
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| End bp | 664133 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383004 |
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| Product | Type I site-specific deoxyribonuclease |
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| Protein accession | YP_003262516 |
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| Protein GI | 261855233 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG CCGAAACCCG CGCCGAACAT ATCGACCCTG CCTTGGCTGC TGCCGGATGG
GGCGTGGTGG CCGGTTCACG CATTCGGCGA GAATACCCGA TTACCTTGGG CCGCATTGAA
GGCGCGGGTA AACGCGGCAA GGCGCTGACG GCCGATTATG TGCTGGAGTA CCGCAATACC
AAGTTGGCGG TGGTCGAGGC CAAGGCGTGG AATAAACCAC TCACCGAGGG CGTGGGCCAA
GCCAAGGATT ATTCCGGCAA ACTCGCCATC CGTTTTGCGT ATGCCACGAA CGGTCAGGGC
ATTTATGGCA TCGATATGGA ATCCGGCGTC GAAGCCGAGC TCGCAAATTA TCCATCCCCG
GATGAATTGT GGGCGCGCAC CTTTGCCAGC CAGAATATTT GGCGTGATCG CTTCGCGGAG
GTGCCGTTCG AGGATCGGGG CGGGTACTTT CAAAGTCGGT ATTATCAAGA CATTGCCATC
GAGCGCGTGC TGGCGGCAAT CGCCGATCAT CAATCGCGCA TTTTGCTCAC CTTGGCGACC
GGTACGGGCA AAACCTTTAT TGCCTTTCAA CTGGCGTGGA AGCTGTTTCA TAGCCGCTGG
AACTTGCGCG ACTGGCAGCG TGAAGCCGAA CCGAGCCGCC GCCCGCGTAT TTTGTTTTTA
GCCGACCGCA ACATTCTCGC CAATCAGGCC TTCAATGCCT TTTCGGCGTT CCCGGAAGAT
GCGTTGGTAC GGATTGATCC TGCCGATATT CGCAAGCAGG GAAGGGTGCC GAAAAACGGC
AGTCTGTTTT TCACGATTTT CCAGACATTC ATGAGTGGGC AGGATGCCGA AGGCCAGCCT
GCACCGTACT TTGGCGATTA CCCGCCGGAT TTTTTCGATT GCATCATTAT CGACGAGTGC
CATCGCGGTG GCGCGAACGA TGAAAGCAAC TGGCGCGGCA TTCTGGCGTA TTTCGCGCCC
GCCGTGCAGC TTGGCTTGAC CGCCACGCCC AAGCGCAAAG ACAACGTGGA TACCTATCAA
TACTTCGGCG AGCCGGTGTT TGTGTATTCA TTGAAGGACG GCATCAATGA TGGTTTTTTG
ACTCCGTTCC GAGTGAAGCA AATCGCCACC ACGCTCGATG AATATGTGTA CACGCCCGAT
GACACGCTGG TGGAAGGCGA GATTGAAGCG GGCAAGCGCT ACGAAGAAGC CGACTTCAAC
AAGATCATCG AGATCAAGGA ACGTGAGCAA AAGCGTGTCG AGATTTTCAT GGCGCAAATT
GACCAGCGCG AGAAAACCAT CGTGTTTTGT GCCACCCAAG AACATGCCCT GGCCGTGCGG
GATTTGATCA ACCAGATCAA GTCCAGCAGC AACCCCGATT ACTGCCAACG GGTAACCGCC
AATGATGGTG CGCGGGGTGA ACACTATCTG CGCGATTTTC AGGACAACGA GAAAACTATC
CCGACGATCC TGACCACATC GCAAAAGCTC TCGACCGGCG TGGACGCCCG CAACGTGCGC
AATATCGTGC TGATGCGCCC CGTCAATTCG ATGATCGAAT TCAAACAGAT TATCGGGCGC
GGCACGCGGC TGTATGACGG CAAGGATTAC TTCACCATCT ATGATTTCGT GAAGGCGCAC
CATCACTTCA ATGACCCCGA ATGGGACGGC GAGCCGCTGG AACCAGAGCC AACCGACCCC
CGCCCACCCC AACCGCCGAG TGAACCAACC CCGCCCGATG GCGTGCGTGA ACCCAGTTCG
TCTTATGAGC GCAAGCCCAA AGTGAAAGTG CAGCTTTCCG ATGGCAAGGC CCGCACCATC
CAGCACATGA TGAGCACGAG CTTCTGGCAC CCGGACGGTA CACCGATGTC TGCCCAGCAG
TTCATGGAAT CGCTGTTTGG TCGCTTGCCG GAGTTTTTCA AGGACGAAGA CGAATTACGG
GCCCTGTGGA GTGACCCCGA AACCCGCAAA CGCTTGCTCG AAGGGCTGGC CGAAAAAGGC
TTCGGTACGG ATCAACTGCG GGAAATGCAA AAGATCATCG ATGCACAAAA TAGTGATCTG
TTCGATGTGT TGGCTTATGT GGCCTACGCC CAAACGCCGC TGAGCCGGGA AGATCGCGCG
GATCGTGCCA TGGCGCTCAT CAGCAGCCAC TTCAACAGCA AACAGCAAGT GTTTCTGGAT
TTCGTGCTTT CGCAGTACAT CAGCGTGGGG GTGGAGGAGT TGGACAAAAC CAAACTCGGC
AGTTTGCTCC GCCTGAAATA CCACGACTCC ATCAACGATG CTATCGCCGA CCTCGGCAAG
CCCGATGAAA TCGGCCAGAT GTTTAGCGGG TTTCAGAAGT TTTTGTATCA GCCAGTGCAA
GCGAAGGTTT AG
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| Protein sequence | MNEAETRAEH IDPALAAAGW GVVAGSRIRR EYPITLGRIE GAGKRGKALT ADYVLEYRNT
KLAVVEAKAW NKPLTEGVGQ AKDYSGKLAI RFAYATNGQG IYGIDMESGV EAELANYPSP
DELWARTFAS QNIWRDRFAE VPFEDRGGYF QSRYYQDIAI ERVLAAIADH QSRILLTLAT
GTGKTFIAFQ LAWKLFHSRW NLRDWQREAE PSRRPRILFL ADRNILANQA FNAFSAFPED
ALVRIDPADI RKQGRVPKNG SLFFTIFQTF MSGQDAEGQP APYFGDYPPD FFDCIIIDEC
HRGGANDESN WRGILAYFAP AVQLGLTATP KRKDNVDTYQ YFGEPVFVYS LKDGINDGFL
TPFRVKQIAT TLDEYVYTPD DTLVEGEIEA GKRYEEADFN KIIEIKEREQ KRVEIFMAQI
DQREKTIVFC ATQEHALAVR DLINQIKSSS NPDYCQRVTA NDGARGEHYL RDFQDNEKTI
PTILTTSQKL STGVDARNVR NIVLMRPVNS MIEFKQIIGR GTRLYDGKDY FTIYDFVKAH
HHFNDPEWDG EPLEPEPTDP RPPQPPSEPT PPDGVREPSS SYERKPKVKV QLSDGKARTI
QHMMSTSFWH PDGTPMSAQQ FMESLFGRLP EFFKDEDELR ALWSDPETRK RLLEGLAEKG
FGTDQLREMQ KIIDAQNSDL FDVLAYVAYA QTPLSREDRA DRAMALISSH FNSKQQVFLD
FVLSQYISVG VEELDKTKLG SLLRLKYHDS INDAIADLGK PDEIGQMFSG FQKFLYQPVQ
AKV
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